Magnesium in PDB 8ru0: Structure of the Undecorated Barbed End of F-Actin.

The binding sites of Magnesium atom in the Structure of the Undecorated Barbed End of F-Actin. (pdb code 8ru0). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 4 binding sites of Magnesium where determined in the Structure of the Undecorated Barbed End of F-Actin., PDB code: 8ru0:
Jump to Magnesium binding site number: 1; 2; 3; 4;

Magnesium binding site 1 out of 4 in the Structure of the Undecorated Barbed End of F-Actin.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Undecorated Barbed End of F-Actin. within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg402 b:53.5 occ:1.00 O2 B:PO4403 2.4 77.0 1.0 O2B B:ADP401 3.0 76.0 1.0 OE1 B:GLN137 3.2 88.5 1.0 O1B B:ADP401 3.4 62.1 1.0 P B:PO4403 3.6 93.9 1.0 PB B:ADP401 3.7 64.8 1.0 O4 B:PO4403 4.0 77.7 1.0 CD B:GLN137 4.0 81.4 1.0 O1 B:PO4403 4.1 83.8 1.0 OD2 B:ASP154 4.3 70.6 1.0 NE2 B:GLN137 4.4 81.7 1.0 O3B B:ADP401 4.5 62.7 1.0 O1A B:ADP401 4.5 56.7 1.0 OD1 B:ASP154 4.5 76.5 1.0 CG2 B:VAL339 4.6 54.4 1.0 NZ B:LYS18 4.8 52.0 1.0 OD2 B:ASP11 4.8 79.0 1.0 OD1 B:ASP11 4.8 71.8 1.0 CG B:ASP154 4.9 72.4 1.0 O3 B:PO4403 4.9 78.4 1.0

Magnesium binding site 2 out of 4 in the Structure of the Undecorated Barbed End of F-Actin.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of the Undecorated Barbed End of F-Actin. within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg402 b:64.5 occ:1.00 O1B A:ADP401 2.3 82.2 1.0 O2 A:PO4403 2.9 82.0 1.0 PB A:ADP401 3.6 74.2 1.0 O1A A:ADP401 3.7 76.9 1.0 OE1 A:GLN137 3.8 94.6 1.0 O2B A:ADP401 3.8 79.1 1.0 P A:PO4403 4.0 100.0 1.0 O4 A:PO4403 4.1 87.5 1.0 CD A:GLN137 4.4 89.9 1.0 O1 A:PO4403 4.5 95.9 1.0 OD1 A:ASP154 4.5 79.7 1.0 NE2 A:GLN137 4.5 92.9 1.0 O3B A:ADP401 4.6 77.3 1.0 O3A A:ADP401 4.6 75.9 1.0 PA A:ADP401 4.7 76.4 1.0 O A:SER155 4.7 74.8 1.0 CG2 A:VAL339 4.8 71.5 1.0 CA A:GLY156 5.0 64.7 1.0

Magnesium binding site 3 out of 4 in the Structure of the Undecorated Barbed End of F-Actin.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Structure of the Undecorated Barbed End of F-Actin. within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg402 b:64.9 occ:1.00 O2 C:PO4403 2.1 83.7 1.0 O1B C:ADP401 2.6 73.7 1.0 P C:PO4403 3.6 97.4 1.0 OD2 C:ASP11 3.7 85.6 1.0 PB C:ADP401 3.8 62.7 1.0 O2B C:ADP401 4.0 57.7 1.0 OD1 C:ASP11 4.0 79.0 1.0 O1A C:ADP401 4.1 57.1 1.0 OE1 C:GLN137 4.1 80.9 1.0 CG C:ASP11 4.3 78.0 1.0 O1 C:PO4403 4.3 84.9 1.0 NE2 C:GLN137 4.3 84.6 1.0 CD C:GLN137 4.3 80.1 1.0 O4 C:PO4403 4.4 74.9 1.0 CA C:GLY13 4.4 72.2 1.0 O3 C:PO4403 4.5 90.0 1.0 O3B C:ADP401 4.7 64.3 1.0 CG2 C:VAL339 4.7 56.4 1.0 CE C:LYS18 4.7 59.9 1.0 OD1 C:ASP154 4.8 67.8 1.0 O3A C:ADP401 4.9 59.8 1.0

Magnesium binding site 4 out of 4 in the Structure of the Undecorated Barbed End of F-Actin.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Structure of the Undecorated Barbed End of F-Actin. within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg401 b:74.3 occ:1.00 O1G D:ATP402 2.1 93.1 1.0 O1B D:ATP402 2.7 85.8 1.0 PG D:ATP402 3.3 98.7 1.0 O3B D:ATP402 3.5 81.6 1.0 PB D:ATP402 3.7 79.2 1.0 OD1 D:ASP11 3.7 99.1 1.0 NE2 D:GLN137 4.0 108.7 1.0 O3G D:ATP402 4.1 91.9 1.0 CD D:GLN137 4.1 107.4 1.0 OD2 D:ASP11 4.2 98.4 1.0 OE1 D:GLN137 4.2 104.5 1.0 NZ D:LYS18 4.3 74.8 1.0 CG D:ASP11 4.4 98.0 1.0 O2A D:ATP402 4.5 73.2 1.0 CA D:GLY13 4.5 84.2 1.0 O2G D:ATP402 4.5 90.4 1.0 O3A D:ATP402 4.7 74.8 1.0 CG2 D:VAL339 4.8 92.4 1.0 CG D:GLN137 4.8 102.3 1.0 O2B D:ATP402 4.8 78.1 1.0 CE D:LYS18 4.9 73.8 1.0 OD2 D:ASP154 5.0 96.3 1.0

W.Oosterheert, M.Boiero Sanders, J.Funk, D.Prumbaum, S.Raunser, P.Bieling. Molecular Mechanism of Actin Filament Elongation By Formins Science V. 384 2024.
ISSN: ESSN 1095-9203