Magnesium in PDB 8s5d: Cryo-Em Structure of ARF1-Decorated Membrane Tubules

All present enzymatic activity of Cryo-Em Structure of ARF1-Decorated Membrane Tubules:
3.6.5.2;

The binding sites of Magnesium atom in the Cryo-Em Structure of ARF1-Decorated Membrane Tubules (pdb code 8s5d). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryo-Em Structure of ARF1-Decorated Membrane Tubules, PDB code: 8s5d:

Magnesium binding site 1 out of 1 in the Cryo-Em Structure of ARF1-Decorated Membrane Tubules


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of ARF1-Decorated Membrane Tubules within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg201 b:30.9 occ:1.00 HG1 A:THR48 1.4 40.9 1.0 O2B A:GSP202 1.9 44.7 1.0 O A:HOH301 1.9 13.4 1.0 OG1 A:THR48 2.0 44.8 1.0 O A:HOH302 2.0 14.1 1.0 OG1 A:THR31 2.0 39.1 1.0 HOG2 A:GSP202 2.1 40.9 1.0 O2G A:GSP202 2.1 47.4 1.0 HG1 A:THR31 2.2 35.5 1.0 PB A:GSP202 3.2 36.8 1.0 CB A:THR48 3.2 39.1 1.0 HB A:THR48 3.3 38.5 1.0 H A:THR31 3.3 31.4 1.0 PG A:GSP202 3.4 38.4 1.0 CB A:THR31 3.4 35.0 1.0 O3B A:GSP202 3.5 36.6 1.0 H A:THR48 3.7 36.7 1.0 HB A:THR31 3.7 33.9 1.0 OD1 A:ASP67 3.8 44.9 1.0 HB2 A:LYS30 3.9 30.7 1.0 HG22 A:THR48 4.0 36.1 1.0 CG2 A:THR48 4.0 36.2 1.0 O1B A:GSP202 4.0 37.9 1.0 HE2 A:LYS30 4.0 31.4 1.0 HG23 A:THR48 4.0 37.0 1.0 OD2 A:ASP67 4.0 43.2 1.0 N A:THR31 4.0 30.2 1.0 N A:THR48 4.1 33.9 1.0 HG22 A:THR31 4.1 35.9 1.0 HOG3 A:GSP202 4.2 34.4 1.0 CG2 A:THR31 4.2 33.9 1.0 CA A:THR48 4.3 33.1 1.0 O3A A:GSP202 4.3 36.7 1.0 O3G A:GSP202 4.3 28.1 1.0 HG23 A:THR31 4.3 31.9 1.0 CA A:THR31 4.3 31.9 1.0 CG A:ASP67 4.3 43.4 1.0 O1A A:GSP202 4.5 36.0 1.0 O A:VAL68 4.5 39.4 1.0 HA A:THR31 4.6 32.5 1.0 O A:ILE46 4.7 46.5 1.0 HA2 A:GLY69 4.7 35.5 1.0 HA A:THR48 4.7 35.1 1.0 HA A:PRO47 4.8 36.8 1.0 O2A A:GSP202 4.8 40.7 1.0 HZ2 A:LYS30 4.8 30.6 1.0 PA A:GSP202 4.8 41.3 1.0 S1G A:GSP202 4.8 62.0 1.0 HZ1 A:LYS30 4.9 32.0 1.0 HG21 A:THR48 4.9 35.8 1.0 CB A:LYS30 4.9 29.9 1.0 CE A:LYS30 4.9 31.7 1.0 H A:LYS30 4.9 30.8 1.0

C.Haupt, D.A.Semchonok, M.T.Stubbs, K.Bacia, A.Desfosses. Cryo-Em Structure of ARF1-Decorated Membrane Tubules To Be Published.