Magnesium in PDB 8tuf: Crystal Structure of Human Norovirus Rna-Dependent Rna-Polymerase

The structure of Crystal Structure of Human Norovirus Rna-Dependent Rna-Polymerase, PDB code: 8tuf was solved by B.V.V.Prasad, S.Kaundal, B.Sankaran, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	37.21 / 2.03
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	83.07, 83.7, 90.72, 90, 90, 90
R / Rfree (%)	20.7 / 24.2

The binding sites of Magnesium atom in the Crystal Structure of Human Norovirus Rna-Dependent Rna-Polymerase (pdb code 8tuf). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Human Norovirus Rna-Dependent Rna-Polymerase, PDB code: 8tuf:

Magnesium binding site 1 out of 1 in the Crystal Structure of Human Norovirus Rna-Dependent Rna-Polymerase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Human Norovirus Rna-Dependent Rna-Polymerase within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg601 b:35.8 occ:1.00 OD2 A:ASP240 2.1 32.8 1.0 O A:THR389 2.5 36.1 1.0 O A:GLU345 2.5 27.5 1.0 OD1 A:ASP344 2.5 35.0 1.0 O A:HOH710 2.7 27.9 1.0 C2 A:EDO608 2.8 51.3 1.0 CG A:ASP240 2.9 32.4 1.0 O2 A:EDO608 3.2 64.3 1.0 OD1 A:ASP240 3.3 34.5 1.0 N A:GLU345 3.5 27.3 1.0 C A:GLU345 3.5 36.8 1.0 C A:THR389 3.7 40.7 1.0 CG A:ASP344 3.7 34.1 1.0 CB A:ASP240 4.1 36.1 1.0 OG1 A:THR389 4.1 54.5 1.0 CA A:GLU345 4.1 30.6 1.0 C1 A:EDO608 4.2 62.9 1.0 CA A:PHE390 4.3 30.2 1.0 CG1 A:ILE346 4.3 41.0 1.0 OD2 A:ASP344 4.4 35.1 1.0 CD1 A:PHE390 4.4 31.1 1.0 N A:PHE390 4.4 31.9 1.0 C A:ASP344 4.5 29.1 1.0 CA A:ASP344 4.6 25.0 1.0 N A:ILE346 4.6 32.9 1.0 O1 A:EDO608 4.6 43.2 1.0 CA A:THR389 4.7 36.0 1.0 CB A:ASP344 4.8 26.1 1.0 CB A:PHE390 4.8 28.3 1.0 N A:THR389 4.9 34.5 1.0 CG A:GLU345 4.9 34.2 1.0

B.V.V.Prasad, S.Kaundal, B.Sankaran. Crystal Structure of Human Norovirus Rna-Dependent Rna-Polymerase To Be Published.