Magnesium in PDB 8vt7: Structure of the Gamma Tubulin Ring Complex Nucleated Microtubule Protofilament.

The binding sites of Magnesium atom in the Structure of the Gamma Tubulin Ring Complex Nucleated Microtubule Protofilament. (pdb code 8vt7). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of the Gamma Tubulin Ring Complex Nucleated Microtubule Protofilament., PDB code: 8vt7:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Structure of the Gamma Tubulin Ring Complex Nucleated Microtubule Protofilament.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Gamma Tubulin Ring Complex Nucleated Microtubule Protofilament. within 5.0Å range: probe atom residue distance (Å) B Occ J:Mg502 b:86.6 occ:1.00 O1G J:GTP501 1.9 107.8 1.0 OE2 J:GLU71 3.1 110.8 1.0 O1B J:GTP501 3.1 95.0 1.0 PG J:GTP501 3.4 84.3 1.0 NZ F:LYS252 3.5 99.0 1.0 CD J:GLU71 3.6 108.3 1.0 OE1 J:GLN11 3.8 94.4 1.0 CB J:GLN11 3.9 83.6 1.0 OE1 J:GLU71 4.0 112.2 1.0 O3B J:GTP501 4.0 71.2 1.0 PB J:GTP501 4.1 80.5 1.0 O2G J:GTP501 4.3 89.7 1.0 O3G J:GTP501 4.3 81.3 1.0 CG J:GLU71 4.4 102.3 1.0 OD2 J:ASP69 4.4 99.5 1.0 OD2 J:ASP98 4.4 100.4 1.0 CB F:ASN247 4.5 88.9 1.0 CD J:GLN11 4.5 92.5 1.0 O1A J:GTP501 4.5 95.6 1.0 N J:GLN11 4.6 77.6 1.0 CB J:ASP98 4.7 96.4 1.0 PA J:GTP501 4.8 99.5 1.0 CA J:GLN11 4.8 74.3 1.0 CG J:GLN11 4.8 84.7 1.0 OD1 F:ASN247 4.9 88.6 1.0 O3A J:GTP501 4.9 83.6 1.0 CE F:LYS252 4.9 94.9 1.0 OD1 J:ASP69 4.9 100.1 1.0 O F:ASN247 5.0 94.8 1.0

Magnesium binding site 2 out of 2 in the Structure of the Gamma Tubulin Ring Complex Nucleated Microtubule Protofilament.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of the Gamma Tubulin Ring Complex Nucleated Microtubule Protofilament. within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg502 b:75.4 occ:1.00 O1G B:GTP501 1.9 108.5 1.0 O1B B:GTP501 2.5 90.3 1.0 PG B:GTP501 3.2 87.8 1.0 OE2 B:GLU71 3.4 114.9 1.0 PB B:GTP501 3.5 85.2 1.0 O3B B:GTP501 3.6 78.7 1.0 CB B:GLN11 3.8 82.8 1.0 CD B:GLU71 3.8 109.0 1.0 O2G B:GTP501 3.8 96.4 1.0 NZ A:LYS252 3.9 93.8 1.0 OD2 B:ASP69 4.1 96.5 1.0 N B:GLN11 4.2 80.4 1.0 OE1 B:GLN11 4.3 96.3 1.0 OE1 B:GLU71 4.3 111.0 1.0 O3G B:GTP501 4.4 77.0 1.0 OD1 B:ASP69 4.4 99.0 1.0 O1A B:GTP501 4.5 96.3 1.0 CG B:GLU71 4.5 104.3 1.0 O3A B:GTP501 4.5 89.9 1.0 CA B:GLN11 4.6 77.6 1.0 PA B:GTP501 4.6 97.9 1.0 CB B:ASP98 4.6 92.6 1.0 CG B:ASP69 4.7 95.0 1.0 O2B B:GTP501 4.8 89.5 1.0 CD B:GLN11 4.8 87.2 1.0 OD2 B:ASP98 4.9 97.5 1.0 CG2 B:THR145 4.9 85.2 1.0 CE A:LYS252 4.9 91.3 1.0 CG B:GLN11 5.0 81.4 1.0

A.Aher, L.Urnavicius, T.M.Kapoor. Structure of Gamma Tubulin Ring Complex Nucleated Microtubule Protofilament. To Be Published.