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Magnesium in PDB 8x4j: Crystal Structure of the Glycosyltransferase Domain of Legionella Seta (Unbound)

Protein crystallography data

The structure of Crystal Structure of the Glycosyltransferase Domain of Legionella Seta (Unbound), PDB code: 8x4j was solved by H.N.Im, Y.Lee, D.M.Jang, H.Hahn, H.S.Kim, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.57 / 2.54
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 139.413, 139.413, 59.944, 90, 90, 120
R / Rfree (%) 19.3 / 24.7

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the Glycosyltransferase Domain of Legionella Seta (Unbound) (pdb code 8x4j). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Glycosyltransferase Domain of Legionella Seta (Unbound), PDB code: 8x4j:

Magnesium binding site 1 out of 1 in 8x4j

Go back to Magnesium Binding Sites List in 8x4j
Magnesium binding site 1 out of 1 in the Crystal Structure of the Glycosyltransferase Domain of Legionella Seta (Unbound)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Glycosyltransferase Domain of Legionella Seta (Unbound) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg501

b:81.6
occ:1.00
CE2 A:TRP36 3.9 56.2 1.0
CD2 A:TRP36 3.9 52.8 1.0
CB A:TYR113 4.1 51.9 1.0
O A:VAL37 4.1 55.5 1.0
CZ2 A:TRP36 4.2 57.5 1.0
CE3 A:TRP36 4.2 53.7 1.0
NE1 A:TRP36 4.3 54.3 1.0
CG A:TRP36 4.4 55.5 1.0
CH2 A:TRP36 4.4 54.0 1.0
CG A:TYR113 4.5 53.9 1.0
CZ3 A:TRP36 4.5 55.5 1.0
CD1 A:TRP36 4.5 54.9 1.0
N A:VAL37 4.5 47.5 1.0
CA A:TRP36 4.7 47.9 1.0
O A:HOH614 4.7 52.4 1.0
OG A:SER277 4.8 110.1 1.0
CD2 A:TYR113 4.9 52.7 1.0
O A:ILE35 5.0 53.8 1.0

Reference:

H.N.Im, Y.Lee, D.M.Jang, H.Hahn, H.S.Kim. Crystal Structure of Legionella Effector Seta Glycosyltransferase Domain in the Unbound Form To Be Published.
Page generated: Tue Feb 25 10:52:44 2025

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