Magnesium in PDB 8x4k: Crystal Structure of the Glycosyltransferase Domain of Legionella Seta in Complex with Updglc

The structure of Crystal Structure of the Glycosyltransferase Domain of Legionella Seta in Complex with Updglc, PDB code: 8x4k was solved by H.N.Im, Y.Lee, D.M.Jang, H.Hahn, H.S.Kim, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	44.19 / 1.90
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	42.14, 63.257, 184.962, 90, 90, 90
R / Rfree (%)	17.5 / 21.1

The binding sites of Magnesium atom in the Crystal Structure of the Glycosyltransferase Domain of Legionella Seta in Complex with Updglc (pdb code 8x4k). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Glycosyltransferase Domain of Legionella Seta in Complex with Updglc, PDB code: 8x4k:

Magnesium binding site 1 out of 1 in the Crystal Structure of the Glycosyltransferase Domain of Legionella Seta in Complex with Updglc


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Glycosyltransferase Domain of Legionella Seta in Complex with Updglc within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg502 b:28.7 occ:1.00 O1B A:UDP501 2.0 28.8 1.0 O A:HOH638 2.1 31.3 1.0 O1A A:UDP501 2.1 28.8 1.0 OD1 A:ASP136 2.2 30.6 1.0 OD2 A:ASP134 2.2 31.8 1.0 OD2 A:ASP136 2.3 29.8 1.0 CG A:ASP136 2.5 31.8 1.0 CG A:ASP134 3.1 32.0 1.0 PB A:UDP501 3.2 30.9 1.0 PA A:UDP501 3.3 29.7 1.0 CB A:ASP134 3.3 29.1 1.0 O3A A:UDP501 3.5 28.1 1.0 O3B A:UDP501 3.8 32.1 1.0 O2 A:BGC503 3.9 43.8 1.0 O A:HOH649 4.0 32.6 1.0 CB A:ASP136 4.0 31.1 1.0 O2A A:UDP501 4.2 30.2 1.0 OD1 A:ASP134 4.3 29.5 1.0 O A:HOH650 4.3 30.7 1.0 OD2 A:ASP169 4.4 39.1 1.0 CB A:ASN274 4.4 31.6 1.0 O2B A:UDP501 4.4 28.8 1.0 O3 A:BGC503 4.5 36.8 1.0 C3 A:BGC503 4.5 63.4 1.0 O5' A:UDP501 4.5 27.7 1.0 NE2 A:GLN160 4.5 41.5 1.0 C5' A:UDP501 4.6 26.2 1.0 CB A:ASP169 4.6 31.9 1.0 C2 A:BGC503 4.8 60.7 1.0 N A:ASP275 4.8 34.4 1.0 CA A:ASP134 4.8 31.6 1.0 N A:ASP136 4.8 33.8 1.0 CA A:ASP136 4.9 29.8 1.0 CA A:ASN274 5.0 31.8 1.0

H.N.Im, Y.Lee, D.M.Jang, H.Hahn, H.S.Kim. Crystal Structure of the Glycosyltransferase Domain of Legionella Seta in Complex with Updglc To Be Published.