Magnesium in PDB 8x4m: Crystal Structure of the Glycosyltransferase Domain of Legionella Seta in Complex with Upd

The structure of Crystal Structure of the Glycosyltransferase Domain of Legionella Seta in Complex with Upd, PDB code: 8x4m was solved by H.N.Im, Y.Lee, D.M.Jang, H.Hahn, H.S.Kim, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.60 / 1.79
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	41.823, 62.795, 176.663, 90, 90, 90
R / Rfree (%)	20.1 / 22.8

The binding sites of Magnesium atom in the Crystal Structure of the Glycosyltransferase Domain of Legionella Seta in Complex with Upd (pdb code 8x4m). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Glycosyltransferase Domain of Legionella Seta in Complex with Upd, PDB code: 8x4m:

Magnesium binding site 1 out of 1 in the Crystal Structure of the Glycosyltransferase Domain of Legionella Seta in Complex with Upd


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Glycosyltransferase Domain of Legionella Seta in Complex with Upd within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg502 b:17.2 occ:1.00 O2B A:UDP501 2.0 17.5 1.0 OD2 A:ASP134 2.1 16.9 1.0 O A:HOH672 2.1 19.1 1.0 O2A A:UDP501 2.1 16.4 1.0 OD1 A:ASP136 2.2 18.4 1.0 OD2 A:ASP136 2.3 18.4 1.0 CG A:ASP136 2.6 18.9 1.0 CG A:ASP134 3.1 17.2 1.0 PB A:UDP501 3.2 17.7 1.0 PA A:UDP501 3.3 16.8 1.0 CB A:ASP134 3.5 16.7 1.0 O3A A:UDP501 3.5 17.1 1.0 O1B A:UDP501 3.8 18.6 1.0 O1 A:GOL507 3.9 43.4 1.0 CB A:ASP136 4.1 18.4 1.0 O A:HOH690 4.1 20.9 1.0 OD1 A:ASP134 4.2 17.2 1.0 O A:HOH625 4.2 15.4 1.0 O1A A:UDP501 4.3 17.1 1.0 O2 A:GOL507 4.3 45.7 1.0 O3B A:UDP501 4.4 18.3 1.0 O5' A:UDP501 4.4 16.0 1.0 OD2 A:ASP169 4.4 22.1 1.0 CB A:ASN274 4.4 20.9 1.0 C3 A:GOL507 4.5 42.0 1.0 C5' A:UDP501 4.5 15.8 1.0 O3 A:GOL507 4.6 37.4 1.0 CB A:ASP169 4.7 19.9 1.0 C2 A:GOL507 4.8 43.1 1.0 OE1 A:GLN160 4.8 29.0 1.0 N A:ASP275 4.8 20.6 1.0 N A:ASP136 4.9 17.8 1.0 C1 A:GOL507 4.9 44.1 1.0 CA A:ASP136 4.9 18.2 1.0 CA A:ASP134 4.9 16.4 1.0 CA A:ASN274 5.0 21.6 1.0

H.N.Im, Y.Lee, D.M.Jang, H.Hahn, H.S.Kim. Crystal Structure of the Glycosyltransferase Domain of Legionella Seta in Complex with Upd To Be Published.