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Magnesium in PDB 8yqv: African Swine Fever Virus Rna Polymerase Core

Enzymatic activity of African Swine Fever Virus Rna Polymerase Core

All present enzymatic activity of African Swine Fever Virus Rna Polymerase Core:
2.7.7.6;

Other elements in 8yqv:

The structure of African Swine Fever Virus Rna Polymerase Core also contains other interesting chemical elements:

Zinc (Zn) 4 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the African Swine Fever Virus Rna Polymerase Core (pdb code 8yqv). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the African Swine Fever Virus Rna Polymerase Core, PDB code: 8yqv:

Magnesium binding site 1 out of 1 in 8yqv

Go back to Magnesium Binding Sites List in 8yqv
Magnesium binding site 1 out of 1 in the African Swine Fever Virus Rna Polymerase Core


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of African Swine Fever Virus Rna Polymerase Core within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1501

b:66.1
occ:1.00
OD1 A:ASP459 1.9 66.0 1.0
OD1 A:ASP461 2.0 65.6 1.0
OD1 A:ASP457 2.3 60.0 1.0
CG A:ASP461 2.6 59.9 1.0
CG A:ASP459 2.7 67.5 1.0
OD2 A:ASP461 2.7 63.1 1.0
OD2 A:ASP459 2.8 64.6 1.0
CG A:ASP457 3.2 63.2 1.0
OD2 A:ASP457 3.4 66.7 1.0
CB A:ASP461 4.1 45.6 1.0
CB A:ASP459 4.1 57.7 1.0
O A:ASP457 4.3 54.3 1.0
N A:ASP459 4.4 56.1 1.0
N A:ASP461 4.4 55.8 1.0
N A:ASP457 4.4 57.7 1.0
CB A:ASP457 4.5 59.0 1.0
C A:ASP457 4.5 49.0 1.0
CA A:ASP461 4.6 45.1 1.0
CA A:ASP459 4.6 49.5 1.0
CA A:ASP457 4.7 56.2 1.0
C A:ASP459 4.7 59.1 1.0
N A:GLY460 4.8 58.6 1.0

Reference:

X.Y.Feng, X.Y.Feng. N/A N/A.
Page generated: Fri Aug 15 21:35:37 2025

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