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Magnesium in PDB 8yqw: Asfv Rna Polymerase-M1249L COMPLEX3

Enzymatic activity of Asfv Rna Polymerase-M1249L COMPLEX3

All present enzymatic activity of Asfv Rna Polymerase-M1249L COMPLEX3:
2.7.7.6;

Other elements in 8yqw:

The structure of Asfv Rna Polymerase-M1249L COMPLEX3 also contains other interesting chemical elements:

Zinc (Zn) 9 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Asfv Rna Polymerase-M1249L COMPLEX3 (pdb code 8yqw). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Asfv Rna Polymerase-M1249L COMPLEX3, PDB code: 8yqw:

Magnesium binding site 1 out of 1 in 8yqw

Go back to Magnesium Binding Sites List in 8yqw
Magnesium binding site 1 out of 1 in the Asfv Rna Polymerase-M1249L COMPLEX3


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Asfv Rna Polymerase-M1249L COMPLEX3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg2001

b:43.8
occ:1.00
OD1 A:ASP459 1.9 39.5 1.0
OD1 A:ASP461 2.1 39.9 1.0
CG A:ASP459 2.6 34.9 1.0
OD2 A:ASP459 2.6 44.1 1.0
CG A:ASP461 3.2 35.1 1.0
OD1 A:ASP457 3.2 34.6 1.0
OD2 A:ASP461 3.6 36.5 1.0
O J:ASP1244 3.7 43.7 1.0
CG A:ASP457 3.9 36.5 1.0
OD2 A:ASP457 3.9 41.0 1.0
CB A:ASP459 4.0 25.2 1.0
N A:ASP461 4.4 33.7 1.0
C A:ASP459 4.4 23.3 1.0
CB A:ASP461 4.5 29.2 1.0
CB J:GLN1249 4.5 48.6 1.0
CG J:GLN1249 4.6 51.1 1.0
CA A:ASP459 4.6 21.6 1.0
N A:GLY460 4.6 28.9 1.0
N A:ASP459 4.6 34.4 1.0
CB J:ALA1247 4.7 42.8 1.0
O J:ALA1247 4.7 50.7 1.0
CA A:ASP461 4.7 30.4 1.0
O A:ASP459 4.7 37.4 1.0
O J:ASN1245 4.7 47.5 1.0
CA J:ASN1245 4.8 39.4 1.0
C J:ASP1244 4.8 42.6 1.0
C A:GLY460 4.8 25.1 1.0
C J:ASN1245 4.9 44.3 1.0

Reference:

X.Y.Feng, X.Y.Feng. N/A N/A.
Page generated: Fri Aug 15 21:35:50 2025

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