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Magnesium in PDB 8yqy: Asfv Rna Polymerase-M1249L Complex Complete

Enzymatic activity of Asfv Rna Polymerase-M1249L Complex Complete

All present enzymatic activity of Asfv Rna Polymerase-M1249L Complex Complete:
2.7.7.6;

Other elements in 8yqy:

The structure of Asfv Rna Polymerase-M1249L Complex Complete also contains other interesting chemical elements:

Zinc (Zn) 9 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Asfv Rna Polymerase-M1249L Complex Complete (pdb code 8yqy). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Asfv Rna Polymerase-M1249L Complex Complete, PDB code: 8yqy:

Magnesium binding site 1 out of 1 in 8yqy

Go back to Magnesium Binding Sites List in 8yqy
Magnesium binding site 1 out of 1 in the Asfv Rna Polymerase-M1249L Complex Complete


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Asfv Rna Polymerase-M1249L Complex Complete within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg2001

b:37.9
occ:1.00
OD2 A:ASP459 2.0 41.1 1.0
OD1 A:ASP461 2.2 50.6 1.0
CG A:ASP459 2.7 45.5 1.0
OD1 A:ASP459 2.7 55.0 1.0
OD1 A:ASP457 3.0 45.9 1.0
CG A:ASP461 3.0 44.5 1.0
OD2 A:ASP461 3.3 40.5 1.0
O J:ASP1244 3.7 50.1 1.0
CG A:ASP457 3.8 42.8 1.0
OD2 A:ASP457 3.8 42.0 1.0
CB A:ASP459 4.1 27.8 1.0
CB A:ASP461 4.4 35.9 1.0
O J:ASN1245 4.5 58.5 1.0
CA J:ASN1245 4.5 42.5 1.0
O J:ALA1247 4.5 55.0 1.0
N A:ASP461 4.6 43.3 1.0
CB J:GLN1249 4.6 55.5 1.0
CB J:ALA1247 4.6 47.6 1.0
C J:ASN1245 4.7 52.2 1.0
C J:ASP1244 4.7 47.7 1.0
N A:ASP459 4.8 35.6 1.0
CA A:ASP459 4.8 22.2 1.0
CA A:ASP461 4.8 37.4 1.0
C A:ASP459 4.8 30.6 1.0
N A:GLY460 4.9 31.8 1.0
O A:ASP457 5.0 46.3 1.0

Reference:

X.Y.Feng, X.Y.Feng. N/A N/A.
Page generated: Fri Aug 15 21:35:58 2025

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