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Magnesium in PDB 8yqz: African Swine Fever Virus Rna Polymerase--Dna Complex

Enzymatic activity of African Swine Fever Virus Rna Polymerase--Dna Complex

All present enzymatic activity of African Swine Fever Virus Rna Polymerase--Dna Complex:
2.7.7.6;

Other elements in 8yqz:

The structure of African Swine Fever Virus Rna Polymerase--Dna Complex also contains other interesting chemical elements:

Zinc (Zn) 4 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the African Swine Fever Virus Rna Polymerase--Dna Complex (pdb code 8yqz). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the African Swine Fever Virus Rna Polymerase--Dna Complex, PDB code: 8yqz:

Magnesium binding site 1 out of 1 in 8yqz

Go back to Magnesium Binding Sites List in 8yqz
Magnesium binding site 1 out of 1 in the African Swine Fever Virus Rna Polymerase--Dna Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of African Swine Fever Virus Rna Polymerase--Dna Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1501

b:17.6
occ:1.00
OD1 A:ASP459 2.0 24.8 1.0
OD1 A:ASP461 2.3 18.6 1.0
OD1 A:ASP457 2.4 13.4 1.0
CG A:ASP459 2.9 20.6 1.0
CG A:ASP461 3.1 11.7 1.0
OD2 A:ASP461 3.1 16.1 1.0
OD2 A:ASP459 3.1 20.5 1.0
CG A:ASP457 3.3 16.5 1.0
OD2 A:ASP457 3.6 21.9 1.0
CB A:ASP459 4.3 13.1 1.0
N A:ASP459 4.4 13.6 1.0
CB A:ASP461 4.5 1.9 1.0
O A:ASP457 4.6 16.1 1.0
N A:ASP461 4.7 13.3 1.0
CB A:ASP457 4.7 13.0 1.0
CA A:ASP459 4.7 7.6 1.0
N A:ASP457 4.7 4.2 1.0
C A:ASP457 4.7 10.0 1.0
C A:ASP459 4.7 14.0 1.0
N A:GLY460 4.9 20.0 1.0
CA A:ASP457 5.0 5.3 1.0

Reference:

X.Y.Feng, X.Y.Feng. N/A N/A.
Page generated: Fri Aug 15 21:36:09 2025

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