Magnesium in PDB 8yuf: Crystal Structure of Hepn (Q64A) Toxin

The structure of Crystal Structure of Hepn (Q64A) Toxin, PDB code: 8yuf was solved by C.Jin, C.Jeon, D.H.Kim, B.J.Lee, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	42.28 / 1.59
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	43.774, 43.772, 163.302, 90, 90, 90
R / Rfree (%)	18.8 / 21.4

The binding sites of Magnesium atom in the Crystal Structure of Hepn (Q64A) Toxin (pdb code 8yuf). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Hepn (Q64A) Toxin, PDB code: 8yuf:

Magnesium binding site 1 out of 1 in the Crystal Structure of Hepn (Q64A) Toxin


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Hepn (Q64A) Toxin within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg201 b:22.2 occ:1.00 OE1 B:GLU47 2.0 24.6 1.0 OE1 A:GLU47 2.2 24.8 1.0 OE1 A:GLN44 2.2 19.8 1.0 OE1 B:GLN44 2.2 18.4 1.0 O B:HOH216 2.9 31.4 1.0 O B:HOH233 3.1 31.8 1.0 CD B:GLU47 3.2 19.4 1.0 CD A:GLU47 3.2 22.7 1.0 HG1 A:THR101 3.3 25.5 1.0 HG1 B:THR101 3.4 24.9 1.0 CD B:GLN44 3.4 20.0 1.0 CD A:GLN44 3.4 20.6 1.0 HA B:GLN44 3.6 17.6 1.0 HA A:GLN44 3.6 19.4 1.0 OE2 B:GLU47 3.7 25.2 1.0 OE2 A:GLU47 3.8 27.1 1.0 OG1 A:THR101 3.9 21.2 1.0 OG1 B:THR101 3.9 20.7 1.0 HE22 B:GLN44 3.9 22.8 1.0 HE22 A:GLN44 4.0 20.1 1.0 HB2 A:GLN44 4.0 18.1 1.0 HB2 B:GLN44 4.0 19.3 1.0 HB2 B:GLU47 4.1 15.0 1.0 HB2 A:GLU47 4.1 19.2 1.0 NE2 B:GLN44 4.1 18.9 1.0 NE2 A:GLN44 4.2 16.7 1.0 CG B:GLU47 4.4 14.8 1.0 CA B:GLN44 4.4 14.6 1.0 CA A:GLN44 4.4 16.1 1.0 CG A:GLU47 4.5 16.8 1.0 CB B:GLN44 4.5 16.0 1.0 CB A:GLN44 4.5 15.1 1.0 HB3 B:GLU47 4.5 15.0 1.0 CG B:GLN44 4.5 16.2 1.0 CG A:GLN44 4.5 18.8 1.0 CB B:GLU47 4.6 12.5 1.0 HB3 A:GLU47 4.6 19.2 1.0 CB A:GLU47 4.6 15.9 1.0 O B:HOH296 4.7 29.8 1.0 O B:HOH305 4.7 34.6 1.0 HG22 A:ILE43 4.7 19.4 1.0 HG22 B:ILE43 4.8 22.4 1.0 HG3 B:GLU47 4.8 17.8 1.0 O A:HOH360 4.9 30.6 1.0 HG3 A:GLU47 4.9 20.2 1.0 HE21 B:GLN44 5.0 22.8 1.0

C.Jin, C.Jeon, D.H.Kim, B.J.Lee. Structural and Functional Study of Hepn-Mnt Module From Legionella Pneumophila To Be Published.