Magnesium in PDB 8z81: Photosynthetic LH2-LH1 Complex From the Purple Bacterium Halorhodospira Halophila
Magnesium Binding Sites:
Magnesium binding site 1 out
of 72 in 8z81
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Magnesium Binding Sites List in 8z81
Magnesium binding site 1 out
of 72 in the Photosynthetic LH2-LH1 Complex From the Purple Bacterium Halorhodospira Halophila
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Photosynthetic LH2-LH1 Complex From the Purple Bacterium Halorhodospira Halophila within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg101
b:21.9
occ:1.00
|
MG
|
A:BCL101
|
0.0
|
21.9
|
1.0
|
NA
|
A:BCL101
|
2.0
|
15.1
|
1.0
|
NC
|
A:BCL101
|
2.0
|
18.6
|
1.0
|
ND
|
A:BCL101
|
2.0
|
10.1
|
1.0
|
NB
|
A:BCL101
|
2.1
|
9.1
|
1.0
|
NE2
|
A:HIS29
|
2.6
|
5.0
|
1.0
|
C4D
|
A:BCL101
|
2.9
|
9.5
|
1.0
|
C4A
|
A:BCL101
|
3.0
|
11.3
|
1.0
|
C1A
|
A:BCL101
|
3.0
|
13.0
|
1.0
|
C4C
|
A:BCL101
|
3.0
|
13.9
|
1.0
|
C1C
|
A:BCL101
|
3.0
|
15.4
|
1.0
|
C1B
|
A:BCL101
|
3.0
|
12.4
|
1.0
|
C4B
|
A:BCL101
|
3.1
|
4.6
|
1.0
|
C1D
|
A:BCL101
|
3.2
|
12.7
|
1.0
|
CHB
|
A:BCL101
|
3.4
|
14.4
|
1.0
|
CHC
|
A:BCL101
|
3.4
|
7.8
|
1.0
|
CHA
|
A:BCL101
|
3.4
|
10.7
|
1.0
|
CE1
|
A:HIS29
|
3.4
|
9.2
|
1.0
|
CHD
|
A:BCL101
|
3.5
|
9.6
|
1.0
|
CD2
|
A:HIS29
|
3.7
|
7.3
|
1.0
|
CBB
|
0:BCL101
|
3.9
|
11.6
|
1.0
|
C30
|
0:PGV102
|
3.9
|
20.1
|
1.0
|
C31
|
0:PGV102
|
4.0
|
21.0
|
1.0
|
CMB
|
0:BCL101
|
4.1
|
13.4
|
1.0
|
C3D
|
A:BCL101
|
4.2
|
9.8
|
1.0
|
C3A
|
A:BCL101
|
4.3
|
16.7
|
1.0
|
C2A
|
A:BCL101
|
4.3
|
13.9
|
1.0
|
C3C
|
A:BCL101
|
4.3
|
15.9
|
1.0
|
C2C
|
A:BCL101
|
4.3
|
18.6
|
1.0
|
C3B
|
A:BCL101
|
4.4
|
13.6
|
1.0
|
C2B
|
A:BCL101
|
4.4
|
13.2
|
1.0
|
C2D
|
A:BCL101
|
4.4
|
9.2
|
1.0
|
CMD
|
B:BCL102
|
4.5
|
9.3
|
1.0
|
ND1
|
A:HIS29
|
4.6
|
10.5
|
1.0
|
C2B
|
0:BCL101
|
4.7
|
10.5
|
1.0
|
CG
|
A:HIS29
|
4.8
|
6.6
|
1.0
|
CAB
|
0:BCL101
|
4.8
|
14.2
|
1.0
|
C27
|
0:PGV102
|
4.9
|
25.6
|
1.0
|
CBD
|
A:BCL101
|
4.9
|
15.0
|
1.0
|
CMA
|
A:BCL101
|
5.0
|
15.4
|
1.0
|
C3B
|
0:BCL101
|
5.0
|
17.4
|
1.0
|
|
Magnesium binding site 2 out
of 72 in 8z81
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Magnesium Binding Sites List in 8z81
Magnesium binding site 2 out
of 72 in the Photosynthetic LH2-LH1 Complex From the Purple Bacterium Halorhodospira Halophila
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Photosynthetic LH2-LH1 Complex From the Purple Bacterium Halorhodospira Halophila within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg102
b:14.4
occ:1.00
|
MG
|
B:BCL102
|
0.0
|
14.4
|
1.0
|
NA
|
B:BCL102
|
2.0
|
17.4
|
1.0
|
NC
|
B:BCL102
|
2.0
|
13.5
|
1.0
|
ND
|
B:BCL102
|
2.0
|
13.7
|
1.0
|
NB
|
B:BCL102
|
2.0
|
11.6
|
1.0
|
NE2
|
B:HIS37
|
2.1
|
19.3
|
1.0
|
C4D
|
B:BCL102
|
2.9
|
5.3
|
1.0
|
CE1
|
B:HIS37
|
3.0
|
14.9
|
1.0
|
C1A
|
B:BCL102
|
3.0
|
11.2
|
1.0
|
C4A
|
B:BCL102
|
3.0
|
19.5
|
1.0
|
C4C
|
B:BCL102
|
3.0
|
13.8
|
1.0
|
C1C
|
B:BCL102
|
3.0
|
9.7
|
1.0
|
C1B
|
B:BCL102
|
3.1
|
15.6
|
1.0
|
C4B
|
B:BCL102
|
3.1
|
11.8
|
1.0
|
CD2
|
B:HIS37
|
3.1
|
13.8
|
1.0
|
C1D
|
B:BCL102
|
3.2
|
9.2
|
1.0
|
CHB
|
B:BCL102
|
3.4
|
14.5
|
1.0
|
CHC
|
B:BCL102
|
3.4
|
11.9
|
1.0
|
CHA
|
B:BCL102
|
3.4
|
11.9
|
1.0
|
CHD
|
B:BCL102
|
3.5
|
13.1
|
1.0
|
CBB
|
C:BCL101
|
4.0
|
9.6
|
1.0
|
ND1
|
B:HIS37
|
4.1
|
20.4
|
1.0
|
CMB
|
C:BCL101
|
4.2
|
15.1
|
1.0
|
C3D
|
B:BCL102
|
4.2
|
10.1
|
1.0
|
CG
|
B:HIS37
|
4.2
|
12.8
|
1.0
|
C2A
|
B:BCL102
|
4.3
|
16.8
|
1.0
|
C3A
|
B:BCL102
|
4.3
|
19.8
|
1.0
|
C3C
|
B:BCL102
|
4.3
|
14.8
|
1.0
|
C2C
|
B:BCL102
|
4.3
|
11.6
|
1.0
|
C3B
|
B:BCL102
|
4.4
|
17.2
|
1.0
|
C2B
|
B:BCL102
|
4.4
|
17.3
|
1.0
|
C2D
|
B:BCL102
|
4.4
|
9.4
|
1.0
|
CMD
|
A:BCL101
|
4.6
|
9.7
|
1.0
|
C2B
|
C:BCL101
|
4.8
|
14.1
|
1.0
|
CD1
|
A:ILE28
|
4.8
|
9.0
|
1.0
|
CAB
|
C:BCL101
|
4.8
|
13.2
|
1.0
|
CBD
|
B:BCL102
|
4.9
|
12.9
|
1.0
|
CAA
|
B:BCL102
|
5.0
|
15.8
|
1.0
|
|
Magnesium binding site 3 out
of 72 in 8z81
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Magnesium Binding Sites List in 8z81
Magnesium binding site 3 out
of 72 in the Photosynthetic LH2-LH1 Complex From the Purple Bacterium Halorhodospira Halophila
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Photosynthetic LH2-LH1 Complex From the Purple Bacterium Halorhodospira Halophila within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg101
b:18.6
occ:1.00
|
MG
|
C:BCL101
|
0.0
|
18.6
|
1.0
|
NA
|
C:BCL101
|
2.0
|
14.8
|
1.0
|
NC
|
C:BCL101
|
2.0
|
20.3
|
1.0
|
ND
|
C:BCL101
|
2.0
|
14.4
|
1.0
|
NB
|
C:BCL101
|
2.0
|
16.7
|
1.0
|
NE2
|
C:HIS29
|
2.5
|
7.2
|
1.0
|
C4D
|
C:BCL101
|
2.9
|
10.6
|
1.0
|
C4A
|
C:BCL101
|
3.0
|
15.2
|
1.0
|
C1A
|
C:BCL101
|
3.0
|
15.4
|
1.0
|
C4C
|
C:BCL101
|
3.0
|
13.2
|
1.0
|
C1C
|
C:BCL101
|
3.0
|
15.8
|
1.0
|
C1B
|
C:BCL101
|
3.0
|
10.0
|
1.0
|
C4B
|
C:BCL101
|
3.1
|
12.8
|
1.0
|
C1D
|
C:BCL101
|
3.2
|
13.3
|
1.0
|
CHB
|
C:BCL101
|
3.3
|
13.1
|
1.0
|
CE1
|
C:HIS29
|
3.3
|
10.6
|
1.0
|
CHA
|
C:BCL101
|
3.4
|
19.1
|
1.0
|
CHC
|
C:BCL101
|
3.4
|
14.3
|
1.0
|
CHD
|
C:BCL101
|
3.5
|
11.0
|
1.0
|
CD2
|
C:HIS29
|
3.6
|
9.7
|
1.0
|
C32
|
B:PGV103
|
3.7
|
29.3
|
1.0
|
CBB
|
B:BCL102
|
3.9
|
12.8
|
1.0
|
C33
|
B:PGV103
|
3.9
|
25.9
|
1.0
|
C3D
|
C:BCL101
|
4.2
|
15.8
|
1.0
|
C2A
|
C:BCL101
|
4.3
|
16.1
|
1.0
|
C3A
|
C:BCL101
|
4.3
|
15.7
|
1.0
|
C3C
|
C:BCL101
|
4.3
|
23.7
|
1.0
|
C2C
|
C:BCL101
|
4.3
|
16.7
|
1.0
|
CMB
|
B:BCL102
|
4.4
|
20.8
|
1.0
|
C2B
|
C:BCL101
|
4.4
|
14.1
|
1.0
|
C3B
|
C:BCL101
|
4.4
|
10.1
|
1.0
|
C2D
|
C:BCL101
|
4.4
|
16.3
|
1.0
|
CMD
|
D:BCL101
|
4.5
|
9.6
|
1.0
|
ND1
|
C:HIS29
|
4.5
|
5.1
|
1.0
|
CG
|
C:HIS29
|
4.7
|
8.8
|
1.0
|
C31
|
B:PGV103
|
4.8
|
26.8
|
1.0
|
CBD
|
C:BCL101
|
4.9
|
15.2
|
1.0
|
C2B
|
B:BCL102
|
4.9
|
17.3
|
1.0
|
CAB
|
B:BCL102
|
4.9
|
15.7
|
1.0
|
|
Magnesium binding site 4 out
of 72 in 8z81
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Magnesium Binding Sites List in 8z81
Magnesium binding site 4 out
of 72 in the Photosynthetic LH2-LH1 Complex From the Purple Bacterium Halorhodospira Halophila
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Photosynthetic LH2-LH1 Complex From the Purple Bacterium Halorhodospira Halophila within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg102
b:30.1
occ:1.00
|
MG
|
C:BCL102
|
0.0
|
30.1
|
1.0
|
NC
|
C:BCL102
|
2.0
|
29.2
|
1.0
|
NA
|
C:BCL102
|
2.0
|
31.6
|
1.0
|
ND
|
C:BCL102
|
2.0
|
32.2
|
1.0
|
NB
|
C:BCL102
|
2.0
|
27.6
|
1.0
|
NE2
|
C:HIS18
|
2.4
|
22.4
|
1.0
|
C4D
|
C:BCL102
|
3.0
|
23.8
|
1.0
|
C4A
|
C:BCL102
|
3.0
|
29.9
|
1.0
|
C4C
|
C:BCL102
|
3.0
|
31.5
|
1.0
|
C1A
|
C:BCL102
|
3.0
|
27.1
|
1.0
|
C1C
|
C:BCL102
|
3.0
|
26.5
|
1.0
|
C1B
|
C:BCL102
|
3.1
|
27.2
|
1.0
|
C4B
|
C:BCL102
|
3.1
|
28.2
|
1.0
|
C1D
|
C:BCL102
|
3.2
|
28.4
|
1.0
|
CE1
|
C:HIS18
|
3.2
|
23.4
|
1.0
|
CHB
|
C:BCL102
|
3.4
|
25.4
|
1.0
|
CD2
|
C:HIS18
|
3.4
|
22.9
|
1.0
|
CHC
|
C:BCL102
|
3.4
|
28.6
|
1.0
|
CHA
|
C:BCL102
|
3.4
|
26.0
|
1.0
|
CHD
|
C:BCL102
|
3.5
|
26.2
|
1.0
|
C14
|
B:BCL102
|
4.0
|
26.9
|
1.0
|
C16
|
B:BCL102
|
4.0
|
21.2
|
1.0
|
C3D
|
C:BCL102
|
4.2
|
24.8
|
1.0
|
C3A
|
C:BCL102
|
4.3
|
26.8
|
1.0
|
C3C
|
C:BCL102
|
4.3
|
26.5
|
1.0
|
C2A
|
C:BCL102
|
4.3
|
26.6
|
1.0
|
C2C
|
C:BCL102
|
4.3
|
27.7
|
1.0
|
ND1
|
C:HIS18
|
4.3
|
27.7
|
1.0
|
C3B
|
C:BCL102
|
4.4
|
31.1
|
1.0
|
C2B
|
C:BCL102
|
4.4
|
26.7
|
1.0
|
C2D
|
C:BCL102
|
4.4
|
27.6
|
1.0
|
CG
|
C:HIS18
|
4.5
|
26.0
|
1.0
|
C13
|
B:BCL102
|
4.6
|
20.7
|
1.0
|
CB
|
D:ALA25
|
4.8
|
25.8
|
1.0
|
C17
|
B:BCL102
|
4.8
|
28.3
|
1.0
|
C7
|
C:BCL101
|
4.9
|
24.6
|
1.0
|
CBD
|
C:BCL102
|
4.9
|
27.9
|
1.0
|
CMA
|
C:BCL102
|
5.0
|
29.5
|
1.0
|
C15
|
B:BCL102
|
5.0
|
22.2
|
1.0
|
|
Magnesium binding site 5 out
of 72 in 8z81
Go back to
Magnesium Binding Sites List in 8z81
Magnesium binding site 5 out
of 72 in the Photosynthetic LH2-LH1 Complex From the Purple Bacterium Halorhodospira Halophila
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Photosynthetic LH2-LH1 Complex From the Purple Bacterium Halorhodospira Halophila within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mg101
b:15.3
occ:1.00
|
MG
|
D:BCL101
|
0.0
|
15.3
|
1.0
|
NA
|
D:BCL101
|
2.0
|
17.3
|
1.0
|
NC
|
D:BCL101
|
2.0
|
18.3
|
1.0
|
ND
|
D:BCL101
|
2.0
|
13.8
|
1.0
|
NB
|
D:BCL101
|
2.0
|
20.6
|
1.0
|
NE2
|
D:HIS37
|
2.2
|
11.0
|
1.0
|
C4D
|
D:BCL101
|
3.0
|
9.9
|
1.0
|
C1A
|
D:BCL101
|
3.0
|
14.1
|
1.0
|
C4A
|
D:BCL101
|
3.0
|
10.9
|
1.0
|
C4C
|
D:BCL101
|
3.0
|
8.9
|
1.0
|
C1C
|
D:BCL101
|
3.0
|
7.9
|
1.0
|
C1B
|
D:BCL101
|
3.0
|
14.4
|
1.0
|
C4B
|
D:BCL101
|
3.1
|
14.9
|
1.0
|
C1D
|
D:BCL101
|
3.1
|
13.1
|
1.0
|
CD2
|
D:HIS37
|
3.1
|
10.8
|
1.0
|
CE1
|
D:HIS37
|
3.2
|
16.6
|
1.0
|
CHB
|
D:BCL101
|
3.4
|
9.8
|
1.0
|
CHC
|
D:BCL101
|
3.4
|
10.3
|
1.0
|
CHA
|
D:BCL101
|
3.4
|
6.9
|
1.0
|
CHD
|
D:BCL101
|
3.5
|
10.6
|
1.0
|
CBB
|
E:BCL101
|
3.9
|
10.3
|
1.0
|
C3D
|
D:BCL101
|
4.2
|
7.7
|
1.0
|
C2A
|
D:BCL101
|
4.3
|
16.7
|
1.0
|
C3A
|
D:BCL101
|
4.3
|
16.1
|
1.0
|
CG
|
D:HIS37
|
4.3
|
9.6
|
1.0
|
ND1
|
D:HIS37
|
4.3
|
12.6
|
1.0
|
C3C
|
D:BCL101
|
4.3
|
16.5
|
1.0
|
C2C
|
D:BCL101
|
4.3
|
4.3
|
1.0
|
CMB
|
E:BCL101
|
4.4
|
7.5
|
1.0
|
C3B
|
D:BCL101
|
4.4
|
14.0
|
1.0
|
C2B
|
D:BCL101
|
4.4
|
13.7
|
1.0
|
C2D
|
D:BCL101
|
4.4
|
8.1
|
1.0
|
CMD
|
C:BCL101
|
4.6
|
12.6
|
1.0
|
CAB
|
E:BCL101
|
4.6
|
13.1
|
1.0
|
C2B
|
E:BCL101
|
4.8
|
10.7
|
1.0
|
CD1
|
C:ILE28
|
4.9
|
14.2
|
1.0
|
CBD
|
D:BCL101
|
4.9
|
11.1
|
1.0
|
C3B
|
E:BCL101
|
4.9
|
12.7
|
1.0
|
|
Magnesium binding site 6 out
of 72 in 8z81
Go back to
Magnesium Binding Sites List in 8z81
Magnesium binding site 6 out
of 72 in the Photosynthetic LH2-LH1 Complex From the Purple Bacterium Halorhodospira Halophila
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Photosynthetic LH2-LH1 Complex From the Purple Bacterium Halorhodospira Halophila within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Mg101
b:18.3
occ:1.00
|
MG
|
E:BCL101
|
0.0
|
18.3
|
1.0
|
NA
|
E:BCL101
|
2.0
|
18.7
|
1.0
|
NC
|
E:BCL101
|
2.0
|
19.5
|
1.0
|
ND
|
E:BCL101
|
2.0
|
15.2
|
1.0
|
NB
|
E:BCL101
|
2.0
|
10.8
|
1.0
|
NE2
|
E:HIS29
|
2.6
|
3.8
|
1.0
|
C4D
|
E:BCL101
|
2.9
|
10.3
|
1.0
|
C4A
|
E:BCL101
|
3.0
|
12.3
|
1.0
|
C1A
|
E:BCL101
|
3.0
|
11.7
|
1.0
|
C4C
|
E:BCL101
|
3.0
|
12.5
|
1.0
|
C1C
|
E:BCL101
|
3.0
|
15.6
|
1.0
|
C1B
|
E:BCL101
|
3.0
|
12.1
|
1.0
|
C4B
|
E:BCL101
|
3.1
|
5.0
|
1.0
|
C1D
|
E:BCL101
|
3.2
|
12.4
|
1.0
|
CHB
|
E:BCL101
|
3.3
|
14.6
|
1.0
|
CHC
|
E:BCL101
|
3.4
|
7.8
|
1.0
|
CE1
|
E:HIS29
|
3.4
|
5.8
|
1.0
|
CHA
|
E:BCL101
|
3.4
|
8.1
|
1.0
|
CHD
|
E:BCL101
|
3.5
|
8.0
|
1.0
|
CD2
|
E:HIS29
|
3.6
|
5.7
|
1.0
|
C30
|
D:PGV102
|
3.9
|
19.9
|
1.0
|
CBB
|
D:BCL101
|
3.9
|
10.8
|
1.0
|
C31
|
D:PGV102
|
4.0
|
21.4
|
1.0
|
CMB
|
D:BCL101
|
4.2
|
13.4
|
1.0
|
C3D
|
E:BCL101
|
4.2
|
11.7
|
1.0
|
C3A
|
E:BCL101
|
4.3
|
17.5
|
1.0
|
C2A
|
E:BCL101
|
4.3
|
17.1
|
1.0
|
C3C
|
E:BCL101
|
4.3
|
11.7
|
1.0
|
C2C
|
E:BCL101
|
4.3
|
15.2
|
1.0
|
C2B
|
E:BCL101
|
4.4
|
10.7
|
1.0
|
C3B
|
E:BCL101
|
4.4
|
12.7
|
1.0
|
C2D
|
E:BCL101
|
4.4
|
9.9
|
1.0
|
CMD
|
F:BCL102
|
4.5
|
12.3
|
1.0
|
ND1
|
E:HIS29
|
4.6
|
8.9
|
1.0
|
CG
|
E:HIS29
|
4.7
|
8.5
|
1.0
|
C2B
|
D:BCL101
|
4.8
|
13.7
|
1.0
|
C27
|
D:PGV102
|
4.8
|
27.0
|
1.0
|
CAB
|
D:BCL101
|
4.9
|
12.6
|
1.0
|
CBD
|
E:BCL101
|
4.9
|
15.3
|
1.0
|
CMA
|
E:BCL101
|
5.0
|
13.3
|
1.0
|
|
Magnesium binding site 7 out
of 72 in 8z81
Go back to
Magnesium Binding Sites List in 8z81
Magnesium binding site 7 out
of 72 in the Photosynthetic LH2-LH1 Complex From the Purple Bacterium Halorhodospira Halophila
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Photosynthetic LH2-LH1 Complex From the Purple Bacterium Halorhodospira Halophila within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Mg102
b:16.8
occ:1.00
|
MG
|
F:BCL102
|
0.0
|
16.8
|
1.0
|
NA
|
F:BCL102
|
2.0
|
16.9
|
1.0
|
NC
|
F:BCL102
|
2.0
|
15.7
|
1.0
|
ND
|
F:BCL102
|
2.0
|
10.3
|
1.0
|
NB
|
F:BCL102
|
2.0
|
14.8
|
1.0
|
NE2
|
F:HIS37
|
2.1
|
13.8
|
1.0
|
C4D
|
F:BCL102
|
3.0
|
7.6
|
1.0
|
CE1
|
F:HIS37
|
3.0
|
12.0
|
1.0
|
C1A
|
F:BCL102
|
3.0
|
15.3
|
1.0
|
C4A
|
F:BCL102
|
3.0
|
15.6
|
1.0
|
C4C
|
F:BCL102
|
3.0
|
12.2
|
1.0
|
C1C
|
F:BCL102
|
3.0
|
8.2
|
1.0
|
C1B
|
F:BCL102
|
3.1
|
15.2
|
1.0
|
C4B
|
F:BCL102
|
3.1
|
12.8
|
1.0
|
CD2
|
F:HIS37
|
3.1
|
11.3
|
1.0
|
C1D
|
F:BCL102
|
3.1
|
9.8
|
1.0
|
CHB
|
F:BCL102
|
3.4
|
11.9
|
1.0
|
CHC
|
F:BCL102
|
3.4
|
9.2
|
1.0
|
CHA
|
F:BCL102
|
3.4
|
12.3
|
1.0
|
CHD
|
F:BCL102
|
3.5
|
13.2
|
1.0
|
CBB
|
G:BCL101
|
4.0
|
9.6
|
1.0
|
CMB
|
G:BCL101
|
4.1
|
14.7
|
1.0
|
ND1
|
F:HIS37
|
4.1
|
17.1
|
1.0
|
C3D
|
F:BCL102
|
4.2
|
9.8
|
1.0
|
CG
|
F:HIS37
|
4.2
|
10.8
|
1.0
|
C2A
|
F:BCL102
|
4.3
|
13.7
|
1.0
|
C3A
|
F:BCL102
|
4.3
|
16.4
|
1.0
|
C3C
|
F:BCL102
|
4.3
|
15.6
|
1.0
|
C2C
|
F:BCL102
|
4.3
|
11.9
|
1.0
|
C3B
|
F:BCL102
|
4.4
|
12.9
|
1.0
|
C2B
|
F:BCL102
|
4.4
|
18.3
|
1.0
|
C2D
|
F:BCL102
|
4.4
|
7.8
|
1.0
|
CMD
|
E:BCL101
|
4.7
|
12.1
|
1.0
|
C2B
|
G:BCL101
|
4.7
|
8.1
|
1.0
|
CAB
|
G:BCL101
|
4.8
|
12.7
|
1.0
|
CD1
|
E:ILE28
|
4.8
|
11.6
|
1.0
|
CBD
|
F:BCL102
|
4.9
|
13.4
|
1.0
|
|
Magnesium binding site 8 out
of 72 in 8z81
Go back to
Magnesium Binding Sites List in 8z81
Magnesium binding site 8 out
of 72 in the Photosynthetic LH2-LH1 Complex From the Purple Bacterium Halorhodospira Halophila
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Photosynthetic LH2-LH1 Complex From the Purple Bacterium Halorhodospira Halophila within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Mg101
b:16.4
occ:1.00
|
MG
|
G:BCL101
|
0.0
|
16.4
|
1.0
|
NA
|
G:BCL101
|
2.0
|
12.9
|
1.0
|
NC
|
G:BCL101
|
2.0
|
18.2
|
1.0
|
ND
|
G:BCL101
|
2.0
|
13.0
|
1.0
|
NB
|
G:BCL101
|
2.0
|
17.0
|
1.0
|
NE2
|
G:HIS29
|
2.5
|
9.0
|
1.0
|
C4D
|
G:BCL101
|
2.9
|
12.5
|
1.0
|
C4A
|
G:BCL101
|
3.0
|
13.1
|
1.0
|
C1A
|
G:BCL101
|
3.0
|
14.7
|
1.0
|
C4C
|
G:BCL101
|
3.0
|
13.4
|
1.0
|
C1C
|
G:BCL101
|
3.0
|
11.9
|
1.0
|
C1B
|
G:BCL101
|
3.0
|
8.3
|
1.0
|
C4B
|
G:BCL101
|
3.1
|
13.7
|
1.0
|
C1D
|
G:BCL101
|
3.2
|
10.1
|
1.0
|
CHB
|
G:BCL101
|
3.3
|
14.3
|
1.0
|
CE1
|
G:HIS29
|
3.3
|
10.2
|
1.0
|
CHA
|
G:BCL101
|
3.4
|
17.3
|
1.0
|
CHC
|
G:BCL101
|
3.4
|
11.7
|
1.0
|
CHD
|
G:BCL101
|
3.5
|
9.8
|
1.0
|
CD2
|
G:HIS29
|
3.6
|
9.3
|
1.0
|
C32
|
F:PGV103
|
3.7
|
24.9
|
1.0
|
C33
|
F:PGV103
|
3.9
|
25.7
|
1.0
|
CBB
|
F:BCL102
|
3.9
|
15.7
|
1.0
|
C3D
|
G:BCL101
|
4.2
|
13.3
|
1.0
|
C2A
|
G:BCL101
|
4.3
|
12.7
|
1.0
|
C3A
|
G:BCL101
|
4.3
|
15.6
|
1.0
|
C3C
|
G:BCL101
|
4.3
|
20.0
|
1.0
|
C2C
|
G:BCL101
|
4.3
|
12.1
|
1.0
|
C2B
|
G:BCL101
|
4.4
|
8.1
|
1.0
|
C3B
|
G:BCL101
|
4.4
|
8.5
|
1.0
|
C2D
|
G:BCL101
|
4.4
|
14.7
|
1.0
|
CMD
|
H:BCL101
|
4.4
|
10.1
|
1.0
|
CMB
|
F:BCL102
|
4.4
|
17.5
|
1.0
|
ND1
|
G:HIS29
|
4.5
|
5.3
|
1.0
|
CG
|
G:HIS29
|
4.7
|
9.0
|
1.0
|
C31
|
F:PGV103
|
4.9
|
23.6
|
1.0
|
CBD
|
G:BCL101
|
4.9
|
12.6
|
1.0
|
CAB
|
F:BCL102
|
4.9
|
18.8
|
1.0
|
C2B
|
F:BCL102
|
4.9
|
18.3
|
1.0
|
CAA
|
G:BCL101
|
5.0
|
19.8
|
1.0
|
|
Magnesium binding site 9 out
of 72 in 8z81
Go back to
Magnesium Binding Sites List in 8z81
Magnesium binding site 9 out
of 72 in the Photosynthetic LH2-LH1 Complex From the Purple Bacterium Halorhodospira Halophila
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Photosynthetic LH2-LH1 Complex From the Purple Bacterium Halorhodospira Halophila within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Mg102
b:32.2
occ:1.00
|
MG
|
G:BCL102
|
0.0
|
32.2
|
1.0
|
NC
|
G:BCL102
|
2.0
|
27.9
|
1.0
|
NA
|
G:BCL102
|
2.0
|
31.1
|
1.0
|
ND
|
G:BCL102
|
2.0
|
32.3
|
1.0
|
NB
|
G:BCL102
|
2.0
|
26.1
|
1.0
|
NE2
|
G:HIS18
|
2.2
|
23.4
|
1.0
|
C4D
|
G:BCL102
|
3.0
|
27.4
|
1.0
|
C4A
|
G:BCL102
|
3.0
|
29.1
|
1.0
|
C4C
|
G:BCL102
|
3.0
|
29.8
|
1.0
|
C1A
|
G:BCL102
|
3.0
|
26.3
|
1.0
|
C1C
|
G:BCL102
|
3.0
|
26.2
|
1.0
|
C1B
|
G:BCL102
|
3.1
|
27.0
|
1.0
|
C4B
|
G:BCL102
|
3.1
|
27.6
|
1.0
|
CE1
|
G:HIS18
|
3.1
|
21.9
|
1.0
|
C1D
|
G:BCL102
|
3.2
|
28.6
|
1.0
|
CD2
|
G:HIS18
|
3.2
|
23.2
|
1.0
|
CHB
|
G:BCL102
|
3.3
|
26.9
|
1.0
|
CHC
|
G:BCL102
|
3.4
|
28.8
|
1.0
|
CHA
|
G:BCL102
|
3.4
|
25.7
|
1.0
|
CHD
|
G:BCL102
|
3.5
|
26.6
|
1.0
|
C16
|
F:BCL102
|
4.0
|
21.3
|
1.0
|
C14
|
F:BCL102
|
4.0
|
28.8
|
1.0
|
C3D
|
G:BCL102
|
4.2
|
25.3
|
1.0
|
ND1
|
G:HIS18
|
4.2
|
25.0
|
1.0
|
C3A
|
G:BCL102
|
4.3
|
21.1
|
1.0
|
C3C
|
G:BCL102
|
4.3
|
31.2
|
1.0
|
CG
|
G:HIS18
|
4.3
|
23.5
|
1.0
|
C2A
|
G:BCL102
|
4.3
|
25.6
|
1.0
|
C2C
|
G:BCL102
|
4.3
|
28.5
|
1.0
|
C3B
|
G:BCL102
|
4.4
|
31.9
|
1.0
|
C2B
|
G:BCL102
|
4.4
|
28.1
|
1.0
|
C2D
|
G:BCL102
|
4.4
|
26.3
|
1.0
|
C13
|
F:BCL102
|
4.6
|
21.2
|
1.0
|
C17
|
F:BCL102
|
4.8
|
24.8
|
1.0
|
CB
|
H:ALA25
|
4.9
|
26.5
|
1.0
|
CBD
|
G:BCL102
|
4.9
|
28.8
|
1.0
|
C7
|
G:BCL101
|
4.9
|
26.6
|
1.0
|
C15
|
F:BCL102
|
5.0
|
22.7
|
1.0
|
|
Magnesium binding site 10 out
of 72 in 8z81
Go back to
Magnesium Binding Sites List in 8z81
Magnesium binding site 10 out
of 72 in the Photosynthetic LH2-LH1 Complex From the Purple Bacterium Halorhodospira Halophila
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Photosynthetic LH2-LH1 Complex From the Purple Bacterium Halorhodospira Halophila within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Mg101
b:17.3
occ:1.00
|
MG
|
H:BCL101
|
0.0
|
17.3
|
1.0
|
NA
|
H:BCL101
|
2.0
|
17.1
|
1.0
|
NC
|
H:BCL101
|
2.0
|
16.6
|
1.0
|
ND
|
H:BCL101
|
2.0
|
16.1
|
1.0
|
NB
|
H:BCL101
|
2.0
|
18.3
|
1.0
|
NE2
|
H:HIS37
|
2.2
|
11.0
|
1.0
|
C4D
|
H:BCL101
|
3.0
|
10.2
|
1.0
|
C4A
|
H:BCL101
|
3.0
|
11.9
|
1.0
|
C1A
|
H:BCL101
|
3.0
|
13.8
|
1.0
|
C4C
|
H:BCL101
|
3.0
|
15.2
|
1.0
|
C1C
|
H:BCL101
|
3.0
|
7.3
|
1.0
|
C1B
|
H:BCL101
|
3.1
|
12.4
|
1.0
|
C4B
|
H:BCL101
|
3.1
|
16.7
|
1.0
|
CD2
|
H:HIS37
|
3.1
|
13.8
|
1.0
|
C1D
|
H:BCL101
|
3.1
|
9.3
|
1.0
|
CE1
|
H:HIS37
|
3.2
|
16.0
|
1.0
|
CHB
|
H:BCL101
|
3.4
|
9.5
|
1.0
|
CHC
|
H:BCL101
|
3.4
|
9.2
|
1.0
|
CHA
|
H:BCL101
|
3.4
|
4.8
|
1.0
|
CHD
|
H:BCL101
|
3.5
|
8.8
|
1.0
|
CBB
|
I:BCL101
|
3.8
|
12.4
|
1.0
|
C3D
|
H:BCL101
|
4.2
|
11.4
|
1.0
|
ND1
|
H:HIS37
|
4.3
|
14.3
|
1.0
|
CG
|
H:HIS37
|
4.3
|
11.4
|
1.0
|
C2A
|
H:BCL101
|
4.3
|
13.1
|
1.0
|
C3A
|
H:BCL101
|
4.3
|
12.8
|
1.0
|
C3C
|
H:BCL101
|
4.3
|
13.1
|
1.0
|
C2C
|
H:BCL101
|
4.3
|
6.7
|
1.0
|
C3B
|
H:BCL101
|
4.4
|
14.3
|
1.0
|
C2B
|
H:BCL101
|
4.4
|
10.5
|
1.0
|
C2D
|
H:BCL101
|
4.4
|
7.8
|
1.0
|
CMB
|
I:BCL101
|
4.4
|
9.1
|
1.0
|
CMD
|
G:BCL101
|
4.6
|
10.0
|
1.0
|
CAB
|
I:BCL101
|
4.6
|
8.6
|
1.0
|
C2B
|
I:BCL101
|
4.9
|
13.9
|
1.0
|
CD1
|
G:ILE28
|
4.9
|
14.8
|
1.0
|
CBD
|
H:BCL101
|
4.9
|
9.4
|
1.0
|
C3B
|
I:BCL101
|
4.9
|
10.9
|
1.0
|
|
Reference:
K.Tani,
K.V.P.Nagashima,
R.Kojima,
M.Kondo,
R.Kanno,
I.Satoh,
M.Kawakami,
N.Hiwatashi,
K.Nakata,
S.Nagashima,
K.Inoue,
Y.Isawa,
R.Morishita,
S.Takaichi,
E.R.Purba,
M.Hall,
L.J.Yu,
M.T.Madigan,
A.Mizoguchi,
B.M.Humbel,
Y.Kimura,
Y.Nagasawa,
T.Dewa,
Z.Y.Wang-Otomo.
A Distinct Double-Ring LH1-LH2 Photocomplex From An Extremophilic Phototroph. Nat Commun V. 16 1410 2025.
ISSN: ESSN 2041-1723
PubMed: 39915441
DOI: 10.1038/S41467-024-55811-9
Page generated: Tue Feb 25 11:07:59 2025
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