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Magnesium in PDB 8za2: Lbadh Mutant L195S/V196L with Nadp

Protein crystallography data

The structure of Lbadh Mutant L195S/V196L with Nadp, PDB code: 8za2 was solved by W.H.Xu, Y.X.Cen, Q.Wu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.74 / 2.78
Space group I 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 188.67, 188.67, 128.6, 90, 90, 90
R / Rfree (%) 18.7 / 21.3

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Lbadh Mutant L195S/V196L with Nadp (pdb code 8za2). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Lbadh Mutant L195S/V196L with Nadp, PDB code: 8za2:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 8za2

Go back to Magnesium Binding Sites List in 8za2
Magnesium binding site 1 out of 2 in the Lbadh Mutant L195S/V196L with Nadp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Lbadh Mutant L195S/V196L with Nadp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg308

b:44.5
occ:1.00
O A:HOH448 2.0 50.0 1.0
O A:GLN251 2.1 50.0 1.0
O A:HOH408 2.1 45.4 1.0
O A:HOH410 2.2 43.9 1.0
O A:HOH456 2.4 48.4 1.0
C A:GLN251 3.0 48.1 1.0
OXT A:GLN251 3.3 50.2 1.0
CA A:GLN251 4.4 40.2 1.0
O A:TYR248 4.4 44.7 1.0
O A:THR249 4.5 38.3 1.0
N A:GLN251 4.6 38.0 1.0
CG1 A:VAL147 4.7 28.3 1.0
C A:THR249 4.8 35.0 1.0
CA A:THR249 4.8 32.1 1.0

Magnesium binding site 2 out of 2 in 8za2

Go back to Magnesium Binding Sites List in 8za2
Magnesium binding site 2 out of 2 in the Lbadh Mutant L195S/V196L with Nadp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Lbadh Mutant L195S/V196L with Nadp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg306

b:36.0
occ:0.50
O B:HOH407 2.3 42.1 1.0
O B:HOH437 2.4 38.6 1.0
OD2 B:ASP115 4.4 45.8 1.0
OD1 B:ASP115 4.6 43.8 1.0
CB B:LEU110 4.8 36.0 1.0
CG B:ASP115 4.9 44.0 1.0

Reference:

W.H.Xu, Y.X.Cen, Q.Wu. Lbadh Mutant L195S/V196L with Nadp To Be Published.
Page generated: Fri Aug 15 22:11:55 2025

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