Magnesium in PDB 8za7: Art-Arh Type Toxin Effector-Immunity Protein Pair of Listeria Monocytogenes

The structure of Art-Arh Type Toxin Effector-Immunity Protein Pair of Listeria Monocytogenes, PDB code: 8za7 was solved by S.Ouyang, G.Hongxin, W.Huan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.49 / 1.65
Space group	P 31
Cell size a, b, c (Å), α, β, γ (°)	84.02, 84.02, 82.81, 90, 90, 120
R / Rfree (%)	16.8 / 19.3

The binding sites of Magnesium atom in the Art-Arh Type Toxin Effector-Immunity Protein Pair of Listeria Monocytogenes (pdb code 8za7). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Art-Arh Type Toxin Effector-Immunity Protein Pair of Listeria Monocytogenes, PDB code: 8za7:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Art-Arh Type Toxin Effector-Immunity Protein Pair of Listeria Monocytogenes


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Art-Arh Type Toxin Effector-Immunity Protein Pair of Listeria Monocytogenes within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg402 b:16.6 occ:1.00 HG A:SER68 1.7 23.3 1.0 OD2 A:ASP282 1.9 20.7 1.0 O A:HOH570 2.1 24.7 1.0 OD1 A:ASP70 2.1 20.8 1.0 OG A:SER68 2.2 19.4 1.0 OD1 A:ASP69 2.2 20.3 1.0 O2D A:AR6401 2.4 25.6 1.0 HO2D A:AR6401 2.9 30.8 1.0 HB2 A:SER68 3.0 19.5 1.0 CB A:SER68 3.1 16.2 1.0 CG A:ASP282 3.1 20.7 1.0 H A:ASP70 3.2 20.4 1.0 CG A:ASP70 3.3 19.8 1.0 CG A:ASP69 3.3 22.6 1.0 H A:ASP69 3.4 21.2 1.0 C2D A:AR6401 3.5 23.6 1.0 HB3 A:SER68 3.6 19.5 1.0 H2D A:AR6401 3.6 28.4 1.0 MG A:MG403 3.6 30.0 1.0 HG1 A:THR283 3.6 20.4 1.0 OD1 A:ASP282 3.7 20.6 1.0 OD2 A:ASP70 3.9 19.2 1.0 N A:ASP69 3.9 17.6 1.0 OD2 A:ASP69 3.9 22.5 1.0 O1D A:AR6401 3.9 32.8 1.0 N A:ASP70 4.0 17.0 1.0 OG1 A:THR283 4.1 17.0 1.0 C1D A:AR6401 4.1 28.6 1.0 OD2 A:ASP111 4.1 23.5 1.0 OD1 A:ASP32 4.2 18.8 1.0 H1D A:AR6401 4.2 34.3 1.0 HB2 A:ASP282 4.2 19.1 1.0 OE1 A:GLU39 4.3 25.5 1.0 CB A:ASP282 4.3 15.9 1.0 CA A:SER68 4.4 17.9 1.0 HD1 A:AR6401 4.4 39.4 1.0 C A:SER68 4.4 19.3 1.0 OE2 A:GLU39 4.5 26.5 1.0 CB A:ASP70 4.5 14.3 1.0 CB A:ASP69 4.5 20.8 1.0 HB2 A:ASP70 4.5 17.2 1.0 HG22 A:VAL36 4.6 21.7 1.0 CA A:ASP69 4.6 17.6 1.0 HB3 A:ASP111 4.6 35.2 1.0 C3D A:AR6401 4.7 23.7 1.0 CD A:GLU39 4.8 28.0 1.0 HB3 A:ASP282 4.8 19.1 1.0 C A:ASP69 4.8 17.3 1.0 CA A:ASP70 4.9 18.3 1.0 HB3 A:ASP69 4.9 25.0 1.0 O3D A:AR6401 4.9 25.6 1.0 H3D A:AR6401 5.0 28.5 1.0 HA A:SER68 5.0 21.5 1.0 H A:SER68 5.0 20.2 1.0

Magnesium binding site 2 out of 2 in the Art-Arh Type Toxin Effector-Immunity Protein Pair of Listeria Monocytogenes


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Art-Arh Type Toxin Effector-Immunity Protein Pair of Listeria Monocytogenes within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg403 b:30.0 occ:1.00 OD1 A:ASP282 1.8 20.6 1.0 HO2D A:AR6401 1.9 30.8 1.0 OD1 A:ASP280 2.0 19.9 1.0 OE2 A:GLU39 2.1 26.5 1.0 OG1 A:THR283 2.4 17.0 1.0 O2D A:AR6401 2.5 25.6 1.0 O3D A:AR6401 2.7 25.6 1.0 CG A:ASP282 2.8 20.7 1.0 HG1 A:THR283 2.8 20.4 1.0 CD A:GLU39 3.0 28.0 1.0 HO3D A:AR6401 3.0 30.8 1.0 H A:THR283 3.0 18.3 1.0 OD2 A:ASP282 3.1 20.7 1.0 CG A:ASP280 3.1 18.9 1.0 HB A:THR283 3.5 20.0 1.0 C2D A:AR6401 3.5 23.6 1.0 CB A:THR283 3.5 16.6 1.0 OD2 A:ASP280 3.5 21.2 1.0 O1D A:AR6401 3.5 32.8 1.0 C3D A:AR6401 3.5 23.7 1.0 OE1 A:GLU39 3.6 25.5 1.0 MG A:MG402 3.6 16.6 1.0 N A:THR283 3.6 15.2 1.0 HG3 A:GLU39 3.7 32.6 1.0 H3D A:AR6401 3.9 28.5 1.0 CG A:GLU39 4.0 27.1 1.0 H A:ASP282 4.0 19.5 1.0 O A:HOH731 4.0 32.6 1.0 HA A:ASP280 4.1 20.7 1.0 O A:HOH570 4.1 24.7 1.0 C1D A:AR6401 4.1 28.6 1.0 CB A:ASP282 4.2 15.9 1.0 CA A:THR283 4.2 15.2 1.0 H2D A:AR6401 4.3 28.4 1.0 HD1 A:AR6401 4.3 39.4 1.0 CB A:ASP280 4.4 16.8 1.0 HG2 A:GLU39 4.4 32.6 1.0 N A:ASP282 4.5 16.2 1.0 OD2 A:ASP70 4.5 19.2 1.0 OD1 A:ASP70 4.5 20.8 1.0 C A:ASP282 4.5 17.3 1.0 CA A:ASP280 4.6 17.2 1.0 HB3 A:ASP282 4.6 19.1 1.0 HA A:THR283 4.6 18.3 1.0 C A:ASP280 4.6 17.0 1.0 CA A:ASP282 4.6 16.4 1.0 HG21 A:THR283 4.6 21.1 1.0 CG2 A:THR283 4.7 17.6 1.0 O A:ASP280 4.7 19.0 1.0 HD21 A:ASN142 4.8 22.3 1.0 HB2 A:ASP282 4.8 19.1 1.0 HG A:SER68 4.8 23.3 1.0 C4D A:AR6401 4.9 28.8 1.0 O4D A:AR6401 4.9 29.2 1.0 HB3 A:ASP280 4.9 20.2 1.0 CG A:ASP70 4.9 19.8 1.0 HB2 A:ASP280 5.0 20.2 1.0

S.Ouyang, G.Hongxin, W.Huan. Art-Arh Type Toxin Effector-Immunity Protein Pair of Listeria Monocytogenes To Be Published.