Magnesium in PDB 9bmw: State-7B-POST2 of Motor Domain From Full-Length Human Dynein-1 in 5 Mm Adp

The binding sites of Magnesium atom in the State-7B-POST2 of Motor Domain From Full-Length Human Dynein-1 in 5 Mm Adp (pdb code 9bmw). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the State-7B-POST2 of Motor Domain From Full-Length Human Dynein-1 in 5 Mm Adp, PDB code: 9bmw:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the State-7B-POST2 of Motor Domain From Full-Length Human Dynein-1 in 5 Mm Adp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of State-7B-POST2 of Motor Domain From Full-Length Human Dynein-1 in 5 Mm Adp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg4705 b:43.9 occ:1.00 O3A A:ADP4701 3.2 47.0 1.0 O3B A:ADP4701 3.4 47.0 1.0 OD1 A:ASP1958 3.9 55.8 1.0 PB A:ADP4701 4.0 47.0 1.0 OD2 A:ASP1958 4.1 55.8 1.0 O1A A:ADP4701 4.4 47.0 1.0 CG A:ASP1958 4.5 55.8 1.0 PA A:ADP4701 4.5 47.0 1.0 O2B A:ADP4701 4.8 47.0 1.0 OE2 A:GLU1959 4.8 60.0 1.0

Magnesium binding site 2 out of 2 in the State-7B-POST2 of Motor Domain From Full-Length Human Dynein-1 in 5 Mm Adp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of State-7B-POST2 of Motor Domain From Full-Length Human Dynein-1 in 5 Mm Adp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg4706 b:48.7 occ:1.00 O1B A:ATP4702 2.0 46.2 1.0 OG A:SER2231 2.0 42.8 1.0 OE2 A:GLU2344 2.2 48.8 1.0 OE2 A:GLU2688 3.2 59.4 1.0 O2G A:ATP4702 3.2 46.2 1.0 PB A:ATP4702 3.2 46.2 1.0 CB A:SER2231 3.3 42.8 1.0 CD A:GLU2344 3.4 48.8 1.0 OD1 A:ASP2304 3.5 59.0 1.0 O3B A:ATP4702 3.6 46.2 1.0 OE1 A:GLU2344 4.0 48.8 1.0 NH2 A:ARG2726 4.0 50.2 1.0 PG A:ATP4702 4.0 46.2 1.0 CD A:GLU2688 4.1 59.4 1.0 CG A:ASP2304 4.3 59.0 1.0 O2B A:ATP4702 4.3 46.2 1.0 OD2 A:ASP2304 4.3 59.0 1.0 OE1 A:GLU2688 4.3 59.4 1.0 O3A A:ATP4702 4.3 46.2 1.0 N A:SER2231 4.3 42.8 1.0 CA A:SER2231 4.4 42.8 1.0 O3G A:ATP4702 4.4 46.2 1.0 CG A:GLU2344 4.5 48.8 1.0 O2A A:ATP4702 4.6 46.2 1.0 CZ A:ARG2726 4.8 50.2 1.0 NH1 A:ARG2726 4.8 50.2 1.0 PA A:ATP4702 4.9 46.2 1.0 O1A A:ATP4702 5.0 46.2 1.0

P.Chai, K.Zhang. Cryo-Em Reveals the Mechanochemical Cycle of Reactive Full-Length Human Dynein-1. To Be Published.