Magnesium in PDB 9bpm: Cryo-Em Structure of Cardiac Muscle Alpha-Actin A331P Hcm Mutant
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Cryo-Em Structure of Cardiac Muscle Alpha-Actin A331P Hcm Mutant
(pdb code 9bpm). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 4 binding sites of Magnesium where determined in the
Cryo-Em Structure of Cardiac Muscle Alpha-Actin A331P Hcm Mutant, PDB code: 9bpm:
Jump to Magnesium binding site number:
1;
2;
3;
4;
Magnesium binding site 1 out
of 4 in 9bpm
Go back to
Magnesium Binding Sites List in 9bpm
Magnesium binding site 1 out
of 4 in the Cryo-Em Structure of Cardiac Muscle Alpha-Actin A331P Hcm Mutant
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Cryo-Em Structure of Cardiac Muscle Alpha-Actin A331P Hcm Mutant within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg402
b:76.0
occ:1.00
|
O3B
|
A:ADP401
|
2.6
|
79.5
|
1.0
|
O2B
|
A:ADP401
|
2.8
|
83.7
|
1.0
|
PB
|
A:ADP401
|
2.9
|
81.5
|
1.0
|
O3A
|
A:ADP401
|
2.9
|
66.9
|
1.0
|
O2A
|
A:ADP401
|
3.9
|
74.8
|
1.0
|
PA
|
A:ADP401
|
4.0
|
71.0
|
1.0
|
NE2
|
A:GLN137
|
4.3
|
71.2
|
1.0
|
OE1
|
A:GLN137
|
4.3
|
71.7
|
1.0
|
O1B
|
A:ADP401
|
4.4
|
63.2
|
1.0
|
CD
|
A:GLN137
|
4.5
|
70.0
|
1.0
|
OD2
|
A:ASP11
|
4.6
|
79.7
|
1.0
|
OD1
|
A:ASP154
|
4.6
|
70.5
|
1.0
|
OD2
|
A:ASP154
|
4.8
|
73.5
|
1.0
|
CA
|
A:GLY156
|
4.8
|
72.1
|
1.0
|
O1A
|
A:ADP401
|
4.9
|
73.5
|
1.0
|
|
Magnesium binding site 2 out
of 4 in 9bpm
Go back to
Magnesium Binding Sites List in 9bpm
Magnesium binding site 2 out
of 4 in the Cryo-Em Structure of Cardiac Muscle Alpha-Actin A331P Hcm Mutant
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Cryo-Em Structure of Cardiac Muscle Alpha-Actin A331P Hcm Mutant within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg402
b:76.0
occ:1.00
|
O3B
|
B:ADP401
|
2.6
|
79.5
|
1.0
|
O2B
|
B:ADP401
|
2.8
|
83.7
|
1.0
|
PB
|
B:ADP401
|
2.9
|
81.5
|
1.0
|
O3A
|
B:ADP401
|
2.9
|
66.9
|
1.0
|
O2A
|
B:ADP401
|
3.9
|
74.8
|
1.0
|
PA
|
B:ADP401
|
4.0
|
71.0
|
1.0
|
NE2
|
B:GLN137
|
4.3
|
71.2
|
1.0
|
OE1
|
B:GLN137
|
4.3
|
71.7
|
1.0
|
O1B
|
B:ADP401
|
4.4
|
63.2
|
1.0
|
CD
|
B:GLN137
|
4.5
|
70.0
|
1.0
|
OD2
|
B:ASP11
|
4.6
|
79.7
|
1.0
|
OD1
|
B:ASP154
|
4.6
|
70.5
|
1.0
|
OD2
|
B:ASP154
|
4.8
|
73.5
|
1.0
|
CA
|
B:GLY156
|
4.8
|
72.1
|
1.0
|
O1A
|
B:ADP401
|
4.9
|
73.5
|
1.0
|
|
Magnesium binding site 3 out
of 4 in 9bpm
Go back to
Magnesium Binding Sites List in 9bpm
Magnesium binding site 3 out
of 4 in the Cryo-Em Structure of Cardiac Muscle Alpha-Actin A331P Hcm Mutant
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Cryo-Em Structure of Cardiac Muscle Alpha-Actin A331P Hcm Mutant within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg402
b:76.0
occ:1.00
|
O3B
|
C:ADP401
|
2.6
|
79.5
|
1.0
|
O2B
|
C:ADP401
|
2.8
|
83.7
|
1.0
|
PB
|
C:ADP401
|
2.9
|
81.5
|
1.0
|
O3A
|
C:ADP401
|
2.9
|
66.9
|
1.0
|
O2A
|
C:ADP401
|
3.9
|
74.8
|
1.0
|
PA
|
C:ADP401
|
4.0
|
71.0
|
1.0
|
NE2
|
C:GLN137
|
4.3
|
71.2
|
1.0
|
OE1
|
C:GLN137
|
4.3
|
71.7
|
1.0
|
O1B
|
C:ADP401
|
4.4
|
63.2
|
1.0
|
CD
|
C:GLN137
|
4.5
|
70.0
|
1.0
|
OD2
|
C:ASP11
|
4.6
|
79.7
|
1.0
|
OD1
|
C:ASP154
|
4.6
|
70.5
|
1.0
|
OD2
|
C:ASP154
|
4.8
|
73.5
|
1.0
|
CA
|
C:GLY156
|
4.8
|
72.1
|
1.0
|
O1A
|
C:ADP401
|
4.9
|
73.5
|
1.0
|
|
Magnesium binding site 4 out
of 4 in 9bpm
Go back to
Magnesium Binding Sites List in 9bpm
Magnesium binding site 4 out
of 4 in the Cryo-Em Structure of Cardiac Muscle Alpha-Actin A331P Hcm Mutant
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Cryo-Em Structure of Cardiac Muscle Alpha-Actin A331P Hcm Mutant within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mg402
b:76.0
occ:1.00
|
O3B
|
D:ADP401
|
2.6
|
79.5
|
1.0
|
O2B
|
D:ADP401
|
2.8
|
83.7
|
1.0
|
PB
|
D:ADP401
|
2.9
|
81.5
|
1.0
|
O3A
|
D:ADP401
|
2.9
|
66.9
|
1.0
|
O2A
|
D:ADP401
|
3.9
|
74.8
|
1.0
|
PA
|
D:ADP401
|
4.0
|
71.0
|
1.0
|
NE2
|
D:GLN137
|
4.3
|
71.2
|
1.0
|
OE1
|
D:GLN137
|
4.3
|
71.7
|
1.0
|
O1B
|
D:ADP401
|
4.4
|
63.2
|
1.0
|
CD
|
D:GLN137
|
4.5
|
70.0
|
1.0
|
OD2
|
D:ASP11
|
4.6
|
79.7
|
1.0
|
OD1
|
D:ASP154
|
4.6
|
70.5
|
1.0
|
OD2
|
D:ASP154
|
4.8
|
73.5
|
1.0
|
CA
|
D:GLY156
|
4.8
|
72.1
|
1.0
|
O1A
|
D:ADP401
|
4.9
|
73.5
|
1.0
|
|
Reference:
H.L.Huang,
S.M.Heissler,
K.Chinthalapudi.
Cryo-Em Structure of Cardiac Muscle Alpha-Actin A331P Hcm Mutant To Be Published.
Page generated: Fri Aug 15 23:27:04 2025
|