Magnesium in PDB 9bs6: Cryoem Structure of THERMOCAS9 in Post-Cleavage State with A Dna Containing Nnnncga Pam

The binding sites of Magnesium atom in the Cryoem Structure of THERMOCAS9 in Post-Cleavage State with A Dna Containing Nnnncga Pam (pdb code 9bs6). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Cryoem Structure of THERMOCAS9 in Post-Cleavage State with A Dna Containing Nnnncga Pam, PDB code: 9bs6:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Cryoem Structure of THERMOCAS9 in Post-Cleavage State with A Dna Containing Nnnncga Pam


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryoem Structure of THERMOCAS9 in Post-Cleavage State with A Dna Containing Nnnncga Pam within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1101 b:0.0 occ:1.00 OG1 A:THR478 2.3 1.5 1.0 OP1 B:C93 2.5 7.7 1.0 O A:ARG475 3.2 11.8 1.0 NE2 A:GLN479 3.2 0.0 1.0 CB A:THR478 3.3 0.7 1.0 CA A:ARG475 3.7 3.1 1.0 P B:C93 3.7 0.4 1.0 C5' B:C93 3.7 0.6 1.0 O5' B:C93 3.7 5.0 1.0 C A:ARG475 3.8 8.2 1.0 N A:GLN479 3.9 4.6 1.0 CG A:GLN479 3.9 0.0 1.0 CD A:GLN479 4.0 0.0 1.0 C A:THR478 4.1 0.0 1.0 CG A:ARG475 4.1 0.0 1.0 NZ A:LYS482 4.2 0.0 1.0 CA A:THR478 4.2 0.0 1.0 CB A:ARG475 4.3 0.0 1.0 CG2 A:THR478 4.4 0.0 1.0 OP2 B:G94 4.4 2.0 1.0 O A:MET474 4.6 15.0 1.0 CA A:GLN479 4.6 3.2 1.0 N A:THR478 4.7 0.0 1.0 O3' B:G92 4.7 2.9 1.0 OP2 B:C93 4.7 0.0 1.0 OP1 B:G94 4.7 2.9 1.0 CB A:GLN479 4.8 0.0 1.0 CE A:LYS482 4.8 0.4 1.0 CE A:MET806 4.8 0.0 1.0 O A:THR478 4.8 0.0 1.0 N A:ARG475 4.8 5.0 1.0 P B:G94 4.9 5.3 1.0 SD A:MET806 4.9 23.6 1.0 O3' B:C93 4.9 5.5 1.0 C4' B:C93 4.9 1.8 1.0

Magnesium binding site 2 out of 2 in the Cryoem Structure of THERMOCAS9 in Post-Cleavage State with A Dna Containing Nnnncga Pam


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Cryoem Structure of THERMOCAS9 in Post-Cleavage State with A Dna Containing Nnnncga Pam within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg201 b:13.4 occ:1.00 O B:HOH303 2.1 0.8 1.0 O6 B:G92 3.9 9.9 1.0 OP1 B:U102 4.0 0.6 1.0 OG1 A:THR812 4.0 11.8 1.0 N7 B:G91 4.1 4.2 1.0 O A:HOH1201 4.1 0.2 1.0 OP2 B:U102 4.2 7.9 1.0 N7 B:G92 4.3 5.6 1.0 O6 B:G91 4.4 12.2 1.0 CG2 A:THR812 4.5 0.0 1.0 P B:U102 4.6 0.9 1.0 C5 B:G91 4.7 1.1 1.0 C6 B:G92 4.8 4.5 1.0 C6 B:G91 4.8 4.5 1.0 CB A:THR812 4.9 0.0 1.0 C8 B:G91 4.9 2.3 1.0 N4 B:C93 4.9 2.5 1.0 C5 B:G92 4.9 5.8 1.0

Y.Shu, Y.Zhao. Cryoem Structure of THERMOCAS9 in Post-Cleavage State with A Dna Containing Nnnncga Pam To Be Published.