Magnesium in PDB 9da8: Tau-Microtubule Structure in the Presence of Atp

The binding sites of Magnesium atom in the Tau-Microtubule Structure in the Presence of Atp (pdb code 9da8). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Tau-Microtubule Structure in the Presence of Atp, PDB code: 9da8:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Tau-Microtubule Structure in the Presence of Atp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Tau-Microtubule Structure in the Presence of Atp within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg502 b:87.0 occ:1.00 O1B B:GTP501 2.0 93.5 1.0 O1G B:GTP501 2.2 91.6 1.0 OE1 B:GLU71 2.8 107.7 1.0 PB B:GTP501 3.3 86.6 1.0 PG B:GTP501 3.4 99.5 1.0 O3B B:GTP501 3.6 82.0 1.0 NZ A:LYS252 3.6 87.0 1.0 CD B:GLU71 4.0 111.0 1.0 OE1 B:GLN11 4.1 76.0 1.0 O3A B:GTP501 4.2 84.8 1.0 OD2 B:ASP98 4.2 114.7 1.0 O3G B:GTP501 4.3 94.5 1.0 CB B:GLN11 4.3 61.2 1.0 O2B B:GTP501 4.4 87.5 1.0 O2G B:GTP501 4.4 94.0 1.0 OE2 B:GLU71 4.6 111.3 1.0 O1A B:GTP501 4.6 82.0 1.0 CB B:ASP98 4.7 106.8 1.0 OD2 B:ASP69 4.7 93.6 1.0 N B:GLN11 4.8 63.2 1.0 CE A:LYS252 4.8 80.6 1.0 CB B:GLU71 4.9 103.5 1.0 OD1 B:ASP69 4.9 96.4 1.0 CG B:ASP98 5.0 112.5 1.0 CD B:GLN11 5.0 74.7 1.0

Magnesium binding site 2 out of 2 in the Tau-Microtubule Structure in the Presence of Atp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Tau-Microtubule Structure in the Presence of Atp within 5.0Å range: probe atom residue distance (Å) B Occ L:Mg502 b:110.4 occ:1.00 O1G L:GTP501 2.0 110.8 1.0 OE2 L:GLU71 2.0 129.2 1.0 O1B L:GTP501 2.0 109.6 1.0 PG L:GTP501 2.9 119.6 1.0 O3B L:GTP501 3.0 112.5 1.0 PB L:GTP501 3.0 113.0 1.0 CD L:GLU71 3.1 127.5 1.0 O2G L:GTP501 3.6 116.9 1.0 CG L:GLU71 3.9 126.2 1.0 OE1 L:GLU71 4.0 127.6 1.0 O3A L:GTP501 4.1 112.9 1.0 NZ K:LYS252 4.1 96.1 1.0 O2B L:GTP501 4.1 112.2 1.0 OD1 L:ASP69 4.2 109.0 1.0 O3G L:GTP501 4.2 119.3 1.0 O1A L:GTP501 4.2 109.0 1.0 CB L:ASP98 4.3 121.2 1.0 OD1 L:ASP98 4.3 125.7 1.0 CB L:GLN11 4.5 75.4 1.0 OD2 L:ASP69 4.5 107.6 1.0 N L:GLN11 4.5 79.8 1.0 OG1 L:THR145 4.5 100.1 1.0 CG L:ASP98 4.6 126.3 1.0 CB L:THR145 4.8 94.0 1.0 PA L:GTP501 4.8 123.2 1.0 CG L:ASP69 4.8 107.5 1.0

L.Grycova, T.Humhalova, J.M.Perez-Bertoldi, J.Peukes, D.Hlubuckova, D.Khuntsariya, A.Krishnan, T.Zdobinsky, A.Dodokova, S.Diez, C.Janke, I.Barvik, L.Libusova, E.Nogales, M.Braun, Z.Lansky. Atp Decline Delocalizes Tau From Microtubules To Be Published.