Magnesium in PDB 9dou: Taeniopygia Guttata R2 Retrotransposon (R2TG) Initiating Target-Primed Reverse Transcription

The structure of Taeniopygia Guttata R2 Retrotransposon (R2TG) Initiating Target-Primed Reverse Transcription also contains other interesting chemical elements:

Zinc

(Zn)

4 atoms

The binding sites of Magnesium atom in the Taeniopygia Guttata R2 Retrotransposon (R2TG) Initiating Target-Primed Reverse Transcription (pdb code 9dou). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Taeniopygia Guttata R2 Retrotransposon (R2TG) Initiating Target-Primed Reverse Transcription, PDB code: 9dou:

Magnesium binding site 1 out of 1 in the Taeniopygia Guttata R2 Retrotransposon (R2TG) Initiating Target-Primed Reverse Transcription


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Taeniopygia Guttata R2 Retrotransposon (R2TG) Initiating Target-Primed Reverse Transcription within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1401 b:18.5 occ:1.00 O1B A:TTP1402 2.2 24.7 1.0 OD2 A:ASP878 2.2 25.2 1.0 OD2 A:ASP777 2.2 31.3 1.0 O1A A:TTP1402 2.3 26.8 1.0 O A:ILE778 2.3 30.6 1.0 CG A:ASP878 3.4 23.4 1.0 CG A:ASP777 3.4 33.3 1.0 O2G A:TTP1402 3.5 28.7 1.0 PB A:TTP1402 3.5 27.5 1.0 PA A:TTP1402 3.5 27.2 1.0 C A:ILE778 3.5 28.5 1.0 O3A A:TTP1402 3.9 27.3 1.0 NZ A:LYS912 3.9 30.6 1.0 OD1 A:ASP878 4.0 24.1 1.0 N A:ILE778 4.1 28.4 1.0 O3G A:TTP1402 4.2 32.2 1.0 CB A:ASP777 4.2 27.2 1.0 PG A:TTP1402 4.2 30.9 1.0 C5' A:TTP1402 4.3 20.1 1.0 O3B A:TTP1402 4.4 33.6 1.0 OD1 A:ASP777 4.4 39.4 1.0 CA A:ILE778 4.4 28.2 1.0 O5' A:TTP1402 4.4 22.5 1.0 N A:ALA779 4.5 29.7 1.0 CB A:ASP878 4.5 19.0 1.0 O2B A:TTP1402 4.5 23.7 1.0 O2A A:TTP1402 4.6 19.6 1.0 CB A:ALA781 4.6 22.0 1.0 CA A:ALA779 4.6 32.4 1.0 C A:ASP777 4.6 29.7 1.0 N A:LYS780 4.7 29.4 1.0 N A:ALA781 4.9 27.1 1.0 C A:ALA779 5.0 31.3 1.0

K.H.K.Edmonds, M.E.Wilkinson, D.Strebinger, H.Chen, B.Lash, S.Zhu, D.Liu, S.Zilberzwige-Tal, A.Ladha, M.L.Walsh, C.J.Frangieh, R.Macrae, X.Wang, F.Zhang. Structure and Biochemistry-Guided Engineering of An All-Rna System For Dna Insertion with R2 Retrotransposons To Be Published.