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Magnesium in PDB 9e2e: The Structure of the Junction Region of the Wild-Type Murine Native Cardiac Thin Filament in CA2+-Free State

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Structure of the Junction Region of the Wild-Type Murine Native Cardiac Thin Filament in CA2+-Free State (pdb code 9e2e). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 6 binding sites of Magnesium where determined in the The Structure of the Junction Region of the Wild-Type Murine Native Cardiac Thin Filament in CA2+-Free State, PDB code: 9e2e:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6;

Magnesium binding site 1 out of 6 in 9e2e

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Magnesium binding site 1 out of 6 in the The Structure of the Junction Region of the Wild-Type Murine Native Cardiac Thin Filament in CA2+-Free State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Structure of the Junction Region of the Wild-Type Murine Native Cardiac Thin Filament in CA2+-Free State within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg402

b:8.0
occ:1.00
OE1 A:GLN137 1.9 13.6 1.0
O1B A:ADP401 2.0 12.0 1.0
CD A:GLN137 3.1 13.6 1.0
PB A:ADP401 3.3 12.0 1.0
O2B A:ADP401 3.7 12.0 1.0
CG A:GLN137 3.8 13.6 1.0
OD2 A:ASP154 4.1 8.8 1.0
NE2 A:GLN137 4.1 13.6 1.0
OD1 A:ASP154 4.2 8.8 1.0
O3B A:ADP401 4.2 12.0 1.0
O3A A:ADP401 4.3 12.0 1.0
CG2 A:VAL339 4.3 10.7 1.0
O1A A:ADP401 4.4 12.0 1.0
NZ A:LYS18 4.5 11.4 1.0
CA A:GLY156 4.5 9.1 1.0
CG A:ASP154 4.6 8.8 1.0
OD2 A:ASP11 4.7 14.5 1.0
PA A:ADP401 5.0 12.0 1.0

Magnesium binding site 2 out of 6 in 9e2e

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Magnesium binding site 2 out of 6 in the The Structure of the Junction Region of the Wild-Type Murine Native Cardiac Thin Filament in CA2+-Free State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of The Structure of the Junction Region of the Wild-Type Murine Native Cardiac Thin Filament in CA2+-Free State within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg402

b:8.0
occ:1.00
O1B B:ADP401 2.0 12.0 1.0
PB B:ADP401 3.3 12.0 1.0
OE1 B:GLN137 3.7 13.6 1.0
O2B B:ADP401 3.7 12.0 1.0
OD1 B:ASP154 3.9 8.8 1.0
O3B B:ADP401 4.2 12.0 1.0
O3A B:ADP401 4.3 12.0 1.0
CG1 B:VAL339 4.3 10.7 1.0
O1A B:ADP401 4.4 12.0 1.0
CA B:GLY156 4.4 9.1 1.0
CG2 B:VAL339 4.5 10.7 1.0
CG B:ASP154 4.6 8.8 1.0
NZ B:LYS18 4.8 11.4 1.0
OD2 B:ASP154 4.8 8.8 1.0
CD B:GLN137 4.8 13.6 1.0
OD2 B:ASP11 4.8 14.5 1.0
OD1 B:ASP11 4.9 14.5 1.0
CB B:GLN137 4.9 13.6 1.0
PA B:ADP401 5.0 12.0 1.0

Magnesium binding site 3 out of 6 in 9e2e

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Magnesium binding site 3 out of 6 in the The Structure of the Junction Region of the Wild-Type Murine Native Cardiac Thin Filament in CA2+-Free State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of The Structure of the Junction Region of the Wild-Type Murine Native Cardiac Thin Filament in CA2+-Free State within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg402

b:8.0
occ:1.00
O1B C:ADP401 2.0 12.0 1.0
NE2 C:GLN137 2.4 13.6 1.0
PB C:ADP401 3.3 12.0 1.0
CD C:GLN137 3.3 13.6 1.0
OD2 C:ASP154 3.5 8.8 1.0
O2B C:ADP401 3.7 12.0 1.0
OE1 C:GLN137 4.0 13.6 1.0
CG C:GLN137 4.1 13.6 1.0
O3B C:ADP401 4.2 12.0 1.0
O3A C:ADP401 4.3 12.0 1.0
CG C:ASP154 4.4 8.8 1.0
O1A C:ADP401 4.4 12.0 1.0
NZ C:LYS18 4.4 11.4 1.0
OD1 C:ASP154 4.4 8.8 1.0
CG2 C:VAL339 4.5 10.7 1.0
CA C:GLY156 4.5 9.1 1.0
OD1 C:ASP11 4.7 14.5 1.0
CA C:GLY13 5.0 13.6 1.0
PA C:ADP401 5.0 12.0 1.0

Magnesium binding site 4 out of 6 in 9e2e

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Magnesium binding site 4 out of 6 in the The Structure of the Junction Region of the Wild-Type Murine Native Cardiac Thin Filament in CA2+-Free State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of The Structure of the Junction Region of the Wild-Type Murine Native Cardiac Thin Filament in CA2+-Free State within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg402

b:8.0
occ:1.00
O1B D:ADP401 2.0 12.0 1.0
NE2 D:GLN137 2.5 13.6 1.0
PB D:ADP401 3.3 12.0 1.0
OD1 D:ASP154 3.7 8.8 1.0
O2B D:ADP401 3.7 12.0 1.0
CD D:GLN137 3.7 13.6 1.0
CG2 D:VAL339 4.1 10.7 1.0
O3B D:ADP401 4.2 12.0 1.0
OE1 D:GLN137 4.3 13.6 1.0
O3A D:ADP401 4.3 12.0 1.0
CA D:GLY156 4.4 9.1 1.0
O1A D:ADP401 4.4 12.0 1.0
CG D:ASP154 4.6 8.8 1.0
OD2 D:ASP154 4.8 8.8 1.0
CG D:GLN137 4.8 13.6 1.0
CB D:GLN137 4.9 13.6 1.0
NZ D:LYS18 4.9 11.4 1.0
CB D:VAL339 4.9 10.7 1.0
OD2 D:ASP11 5.0 14.5 1.0
PA D:ADP401 5.0 12.0 1.0

Magnesium binding site 5 out of 6 in 9e2e

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Magnesium binding site 5 out of 6 in the The Structure of the Junction Region of the Wild-Type Murine Native Cardiac Thin Filament in CA2+-Free State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of The Structure of the Junction Region of the Wild-Type Murine Native Cardiac Thin Filament in CA2+-Free State within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Mg402

b:8.0
occ:1.00
O1B E:ADP401 2.0 12.0 1.0
OE1 E:GLN137 2.4 13.6 1.0
PB E:ADP401 3.3 12.0 1.0
CD E:GLN137 3.4 13.6 1.0
O2B E:ADP401 3.7 12.0 1.0
OD2 E:ASP154 3.8 8.8 1.0
OD1 E:ASP154 4.0 8.8 1.0
CG E:GLN137 4.1 13.6 1.0
O3B E:ADP401 4.2 12.0 1.0
OD2 E:ASP11 4.3 14.5 1.0
O3A E:ADP401 4.3 12.0 1.0
CG E:ASP154 4.3 8.8 1.0
NE2 E:GLN137 4.4 13.6 1.0
CA E:GLY156 4.4 9.1 1.0
O1A E:ADP401 4.4 12.0 1.0
CG2 E:VAL339 4.6 10.7 1.0
OD1 E:ASP11 4.7 14.5 1.0
CG E:ASP11 5.0 14.5 1.0
NZ E:LYS18 5.0 11.4 1.0
PA E:ADP401 5.0 12.0 1.0

Magnesium binding site 6 out of 6 in 9e2e

Go back to Magnesium Binding Sites List in 9e2e
Magnesium binding site 6 out of 6 in the The Structure of the Junction Region of the Wild-Type Murine Native Cardiac Thin Filament in CA2+-Free State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of The Structure of the Junction Region of the Wild-Type Murine Native Cardiac Thin Filament in CA2+-Free State within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Mg402

b:8.0
occ:1.00
O1B F:ADP401 2.0 12.0 1.0
PB F:ADP401 3.3 12.0 1.0
O2B F:ADP401 3.7 12.0 1.0
OD2 F:ASP154 3.8 8.8 1.0
O3B F:ADP401 4.2 12.0 1.0
CG2 F:VAL339 4.2 10.7 1.0
O3A F:ADP401 4.3 12.0 1.0
O1A F:ADP401 4.4 12.0 1.0
OD1 F:ASP154 4.4 8.8 1.0
CA F:GLY156 4.5 9.1 1.0
OE1 F:GLN137 4.5 13.6 1.0
CG F:ASP154 4.6 8.8 1.0
NZ F:LYS18 4.7 11.4 1.0
CD F:GLN137 4.7 13.6 1.0
OD2 F:ASP11 4.7 14.5 1.0
NE2 F:GLN137 5.0 13.6 1.0
CA F:GLY13 5.0 13.6 1.0
PA F:ADP401 5.0 12.0 1.0

Reference:

V.E.Galkin, C.M.Risi. The Structure of the Junction Region of the Murine Wild-Type Native Cardiac Thin Filament. To Be Published.
Page generated: Sat Aug 16 00:53:22 2025

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