Magnesium in PDB 9ec8: Active State of Wild-Type ESCAS13D Ternary Complex

The binding sites of Magnesium atom in the Active State of Wild-Type ESCAS13D Ternary Complex (pdb code 9ec8). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Active State of Wild-Type ESCAS13D Ternary Complex, PDB code: 9ec8:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Active State of Wild-Type ESCAS13D Ternary Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Active State of Wild-Type ESCAS13D Ternary Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1001 b:108.7 occ:1.00 NH2 A:ARG849 2.8 107.7 1.0 CE1 A:HIS300 3.0 102.2 1.0 NE2 A:HIS300 3.5 98.4 1.0 CE1 A:HIS854 3.5 98.5 1.0 CB A:CYS853 3.6 87.3 1.0 SG A:CYS853 3.8 127.6 1.0 CZ A:ARG849 4.0 97.9 1.0 ND1 A:HIS854 4.1 90.4 1.0 ND1 A:HIS300 4.2 100.5 1.0 NE2 A:HIS854 4.3 94.8 1.0 SD A:MET218 4.5 123.3 1.0 NH1 A:ARG849 4.6 92.6 1.0 NH2 A:ARG295 4.7 106.2 1.0 NH1 A:ARG295 4.8 108.2 1.0 CD2 A:HIS300 4.8 92.2 1.0 CA A:CYS853 5.0 76.3 1.0

Magnesium binding site 2 out of 2 in the Active State of Wild-Type ESCAS13D Ternary Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Active State of Wild-Type ESCAS13D Ternary Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg101 b:65.0 occ:1.00 OP1 B:U23 2.3 101.4 1.0 P B:U23 3.4 100.7 1.0 O3' B:G22 3.5 91.0 1.0 OP2 B:U25 3.9 107.2 1.0 OP2 B:A28 4.2 97.7 1.0 OP2 B:U23 4.3 96.4 1.0 OD2 A:ASP186 4.3 104.3 1.0 O5' B:U23 4.6 95.7 1.0 C5' B:U23 4.8 90.8 1.0 C3' B:G22 4.8 87.3 1.0

K.Hu, C.W.Chou, C.O.Wilke, I.J.Finkelstein. Distinct Horizontal Transfer Mechanisms For Type I and Type V Crispr-Associated Transposons. Nat Commun V. 15 6653 2024.
ISSN: ESSN 2041-1723
PubMed: 39103341
DOI: 10.1038/S41467-024-50816-W