Magnesium in PDB 9exq: Wzc-K540M-3YE-N711Y Mgadp C1

The binding sites of Magnesium atom in the Wzc-K540M-3YE-N711Y Mgadp C1 (pdb code 9exq). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 8 binding sites of Magnesium where determined in the Wzc-K540M-3YE-N711Y Mgadp C1, PDB code: 9exq:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Magnesium binding site 1 out of 8 in the Wzc-K540M-3YE-N711Y Mgadp C1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Wzc-K540M-3YE-N711Y Mgadp C1 within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg1001 b:28.5 occ:1.00 O3B D:ADP1000 1.9 22.6 1.0 OG1 D:THR541 2.2 8.9 1.0 PB D:ADP1000 3.3 22.6 1.0 CB D:THR541 3.6 8.9 1.0 OD2 D:ASP642 3.6 200.6 1.0 O1B D:ADP1000 3.7 22.6 1.0 OD2 D:ASP564 3.9 13.6 1.0 N D:THR541 4.0 8.9 1.0 O2B D:ADP1000 4.2 22.6 1.0 O3A D:ADP1000 4.3 22.6 1.0 OD1 D:ASP642 4.3 200.6 1.0 CA D:THR541 4.3 8.9 1.0 CG D:ASP642 4.4 200.6 1.0 CG2 D:THR541 4.5 8.9 1.0 OH C:TYR713 4.5 16.6 1.0 O2A D:ADP1000 4.6 22.6 1.0 O D:THR643 4.7 91.8 1.0 CB D:MET540 4.7 7.6 1.0 PA D:ADP1000 4.9 22.6 1.0 CG D:ASP564 4.9 13.6 1.0 C D:MET540 4.9 7.6 1.0 O1A D:ADP1000 4.9 22.6 1.0

Magnesium binding site 2 out of 8 in the Wzc-K540M-3YE-N711Y Mgadp C1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Wzc-K540M-3YE-N711Y Mgadp C1 within 5.0Å range: probe atom residue distance (Å) B Occ E:Mg1001 b:23.9 occ:1.00 O3B E:ADP1000 1.9 31.5 1.0 OG1 E:THR541 2.2 9.2 1.0 PB E:ADP1000 3.2 31.5 1.0 O1B E:ADP1000 3.5 31.5 1.0 CB E:THR541 3.6 9.2 1.0 OD2 E:ASP564 3.8 11.3 1.0 OD2 E:ASP642 3.9 10.8 1.0 O3A E:ADP1000 4.1 31.5 1.0 N E:THR541 4.1 9.2 1.0 O2B E:ADP1000 4.3 31.5 1.0 CA E:THR541 4.4 9.2 1.0 CG2 E:THR541 4.5 9.2 1.0 O2A E:ADP1000 4.5 31.5 1.0 OH D:TYR713 4.5 16.1 1.0 OD1 E:ASP642 4.6 10.8 1.0 CG E:ASP642 4.6 10.8 1.0 PA E:ADP1000 4.7 31.5 1.0 O1A E:ADP1000 4.7 31.5 1.0 CG E:ASP564 4.8 11.3 1.0 O E:THR643 4.9 9.2 1.0 CE E:MET540 4.9 8.4 1.0 CE2 E:TYR569 5.0 31.7 1.0

Magnesium binding site 3 out of 8 in the Wzc-K540M-3YE-N711Y Mgadp C1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Wzc-K540M-3YE-N711Y Mgadp C1 within 5.0Å range: probe atom residue distance (Å) B Occ F:Mg1001 b:21.8 occ:1.00 O3B F:ADP1000 1.9 31.5 1.0 OG1 F:THR541 2.1 13.7 1.0 PB F:ADP1000 3.3 31.5 1.0 CB F:THR541 3.5 13.7 1.0 OD2 F:ASP642 3.8 5.4 1.0 OD2 F:ASP564 3.8 7.9 1.0 O1B F:ADP1000 3.8 31.5 1.0 O3A F:ADP1000 4.0 31.5 1.0 N F:THR541 4.1 13.7 1.0 CA F:THR541 4.3 13.7 1.0 O2B F:ADP1000 4.3 31.5 1.0 CG2 F:THR541 4.4 13.7 1.0 OD1 F:ASP642 4.5 5.4 1.0 O2A F:ADP1000 4.5 31.5 1.0 CG F:ASP642 4.6 5.4 1.0 OH E:TYR713 4.6 17.1 1.0 CB F:MET540 4.7 10.8 1.0 PA F:ADP1000 4.7 31.5 1.0 CE F:MET540 4.7 10.8 1.0 O1A F:ADP1000 4.8 31.5 1.0 CG F:ASP564 4.9 7.9 1.0 O F:THR643 4.9 4.3 1.0

Magnesium binding site 4 out of 8 in the Wzc-K540M-3YE-N711Y Mgadp C1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Wzc-K540M-3YE-N711Y Mgadp C1 within 5.0Å range: probe atom residue distance (Å) B Occ G:Mg1001 b:31.5 occ:1.00 O3B G:ADP1000 1.9 31.5 1.0 OG1 G:THR541 2.1 11.8 1.0 PB G:ADP1000 3.3 31.5 1.0 CB G:THR541 3.5 11.8 1.0 OD2 G:ASP642 3.6 2.8 1.0 OD2 G:ASP564 3.8 11.5 1.0 O1B G:ADP1000 3.8 31.5 1.0 N G:THR541 4.0 11.8 1.0 O2B G:ADP1000 4.2 31.5 1.0 CA G:THR541 4.3 11.8 1.0 O3A G:ADP1000 4.3 31.5 1.0 CG2 G:THR541 4.4 11.8 1.0 CG G:ASP642 4.4 2.8 1.0 OD1 G:ASP642 4.5 2.8 1.0 OH F:TYR713 4.6 17.1 1.0 O2A G:ADP1000 4.6 31.5 1.0 CG G:ASP564 4.8 11.5 1.0 CB G:MET540 4.8 11.3 1.0 O G:THR643 4.9 1.0 1.0 O1A G:ADP1000 4.9 31.5 1.0 PA G:ADP1000 4.9 31.5 1.0 CE2 G:TYR569 5.0 35.9 1.0 C G:MET540 5.0 11.3 1.0

Magnesium binding site 5 out of 8 in the Wzc-K540M-3YE-N711Y Mgadp C1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Wzc-K540M-3YE-N711Y Mgadp C1 within 5.0Å range: probe atom residue distance (Å) B Occ H:Mg1001 b:23.5 occ:1.00 O3B H:ADP1000 1.9 31.5 1.0 OG1 H:THR541 2.2 14.2 1.0 PB H:ADP1000 3.3 31.5 1.0 CB H:THR541 3.6 14.2 1.0 OD2 H:ASP642 3.7 56.1 1.0 OD2 H:ASP564 3.7 7.6 1.0 O1B H:ADP1000 3.8 31.5 1.0 N H:THR541 4.1 14.2 1.0 O2B H:ADP1000 4.2 31.5 1.0 O3A H:ADP1000 4.3 31.5 1.0 CA H:THR541 4.4 14.2 1.0 OD1 H:ASP642 4.5 56.1 1.0 CG H:ASP642 4.5 56.1 1.0 CG2 H:THR541 4.5 14.2 1.0 O2A H:ADP1000 4.5 31.5 1.0 OH G:TYR713 4.6 15.2 1.0 CB H:MET540 4.7 10.5 1.0 O H:THR643 4.8 31.5 1.0 CE H:MET540 4.8 10.5 1.0 CG H:ASP564 4.8 7.6 1.0 PA H:ADP1000 4.9 31.5 1.0 O1A H:ADP1000 4.9 31.5 1.0

Magnesium binding site 6 out of 8 in the Wzc-K540M-3YE-N711Y Mgadp C1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Wzc-K540M-3YE-N711Y Mgadp C1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1001 b:23.7 occ:1.00 O3B A:ADP1000 1.9 31.5 1.0 OG1 A:THR541 2.3 9.5 1.0 PB A:ADP1000 3.1 31.5 1.0 O1B A:ADP1000 3.4 31.5 1.0 CB A:THR541 3.7 9.5 1.0 OD2 A:ASP564 3.7 8.2 1.0 OD2 A:ASP642 3.8 6.7 1.0 N A:THR541 4.1 9.5 1.0 O3A A:ADP1000 4.2 31.5 1.0 O2B A:ADP1000 4.2 31.5 1.0 OD1 A:ASP642 4.4 6.7 1.0 CA A:THR541 4.4 9.5 1.0 OH H:TYR713 4.5 14.8 1.0 O2A A:ADP1000 4.5 31.5 1.0 CG A:ASP642 4.5 6.7 1.0 CG2 A:THR541 4.6 9.5 1.0 CB A:MET540 4.7 8.4 1.0 PA A:ADP1000 4.8 31.5 1.0 CE A:MET540 4.8 8.4 1.0 CG A:ASP564 4.8 8.2 1.0 O A:THR643 4.8 4.8 1.0 O1A A:ADP1000 4.9 31.5 1.0 CE2 A:TYR569 4.9 39.6 1.0

Magnesium binding site 7 out of 8 in the Wzc-K540M-3YE-N711Y Mgadp C1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Wzc-K540M-3YE-N711Y Mgadp C1 within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg1001 b:21.0 occ:1.00 O3B B:ADP1000 1.9 31.5 1.0 OG1 B:THR541 2.3 11.9 1.0 PB B:ADP1000 3.3 31.5 1.0 CB B:THR541 3.6 11.9 1.0 OD2 B:ASP642 3.8 1.4 1.0 OD2 B:ASP564 3.8 7.7 1.0 O1B B:ADP1000 3.8 31.5 1.0 N B:THR541 4.1 11.9 1.0 O3A B:ADP1000 4.2 31.5 1.0 O2B B:ADP1000 4.2 31.5 1.0 CA B:THR541 4.4 11.9 1.0 OH A:TYR713 4.4 15.9 1.0 OD1 B:ASP642 4.4 1.4 1.0 CG B:ASP642 4.5 1.4 1.0 CG2 B:THR541 4.6 11.9 1.0 O2A B:ADP1000 4.6 31.5 1.0 CB B:MET540 4.8 10.9 1.0 CE2 B:TYR569 4.8 34.1 1.0 O1A B:ADP1000 4.8 31.5 1.0 CE B:MET540 4.8 10.9 1.0 PA B:ADP1000 4.8 31.5 1.0 CG B:ASP564 4.8 7.7 1.0 O B:THR643 4.9 1.7 1.0

Magnesium binding site 8 out of 8 in the Wzc-K540M-3YE-N711Y Mgadp C1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Wzc-K540M-3YE-N711Y Mgadp C1 within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg1001 b:31.5 occ:1.00 O3B C:ADP1000 1.9 14.1 1.0 OG1 C:THR541 2.2 5.9 1.0 PB C:ADP1000 3.3 14.1 1.0 CB C:THR541 3.6 5.9 1.0 OD2 C:ASP642 3.7 2.0 1.0 OD2 C:ASP564 3.7 7.3 1.0 O1B C:ADP1000 3.8 14.1 1.0 N C:THR541 4.1 5.9 1.0 O3A C:ADP1000 4.2 14.1 1.0 O2B C:ADP1000 4.2 14.1 1.0 CA C:THR541 4.4 5.9 1.0 OD1 C:ASP642 4.4 2.0 1.0 CG C:ASP642 4.4 2.0 1.0 OH B:TYR713 4.5 16.2 1.0 CG2 C:THR541 4.5 5.9 1.0 O2A C:ADP1000 4.8 14.1 1.0 CG C:ASP564 4.8 7.3 1.0 O C:THR643 4.8 1.3 1.0 CB C:MET540 4.9 4.9 1.0 O1A C:ADP1000 4.9 14.1 1.0 CE2 C:TYR569 4.9 34.5 1.0 PA C:ADP1000 4.9 14.1 1.0

Y.Yang, J.W.Liu. Bacterial Tyrosine Kinase Wzc To Be Published.