Magnesium in PDB 9exr: Wzc-K540M-3YE-N711Y Mgadp C8

The binding sites of Magnesium atom in the Wzc-K540M-3YE-N711Y Mgadp C8 (pdb code 9exr). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 8 binding sites of Magnesium where determined in the Wzc-K540M-3YE-N711Y Mgadp C8, PDB code: 9exr:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Magnesium binding site 1 out of 8 in the Wzc-K540M-3YE-N711Y Mgadp C8


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Wzc-K540M-3YE-N711Y Mgadp C8 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1001 b:17.3 occ:1.00 O1B A:ADP1000 1.9 6.3 1.0 OG1 A:THR541 2.3 5.5 1.0 PB A:ADP1000 3.2 6.3 1.0 CB A:THR541 3.3 5.5 1.0 O3B A:ADP1000 3.4 6.3 1.0 N A:THR541 3.9 5.5 1.0 OD2 A:ASP642 4.1 2.1 1.0 O3A A:ADP1000 4.1 6.3 1.0 CA A:THR541 4.2 5.5 1.0 OD2 A:ASP564 4.3 6.7 1.0 O2B A:ADP1000 4.3 6.3 1.0 CE A:MET540 4.3 5.7 1.0 O2A A:ADP1000 4.3 6.3 1.0 CG2 A:THR541 4.4 5.5 1.0 PA A:ADP1000 4.6 6.3 1.0 OH H:TYR713 4.6 9.1 1.0 O1A A:ADP1000 4.7 6.3 1.0 OD1 A:ASP642 4.7 2.1 1.0 CG A:ASP642 4.8 2.1 1.0 CE2 A:TYR569 4.9 21.5 1.0 CB A:MET540 4.9 5.7 1.0 C A:MET540 4.9 5.7 1.0 O A:THR643 4.9 3.0 1.0

Magnesium binding site 2 out of 8 in the Wzc-K540M-3YE-N711Y Mgadp C8


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Wzc-K540M-3YE-N711Y Mgadp C8 within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg1001 b:17.3 occ:1.00 O1B B:ADP1000 1.9 7.4 1.0 OG1 B:THR541 2.3 7.0 1.0 PB B:ADP1000 3.2 7.4 1.0 CB B:THR541 3.3 7.0 1.0 O3B B:ADP1000 3.4 7.4 1.0 N B:THR541 3.9 7.0 1.0 OD2 B:ASP642 4.1 4.5 1.0 O3A B:ADP1000 4.1 7.4 1.0 CA B:THR541 4.2 7.0 1.0 OD2 B:ASP564 4.3 6.8 1.0 O2B B:ADP1000 4.3 7.4 1.0 O2A B:ADP1000 4.3 7.4 1.0 CG2 B:THR541 4.4 7.0 1.0 OH A:TYR713 4.5 9.8 1.0 PA B:ADP1000 4.6 7.4 1.0 O1A B:ADP1000 4.7 7.4 1.0 OD1 B:ASP642 4.7 4.5 1.0 CE B:MET540 4.8 7.4 1.0 CG B:ASP642 4.8 4.5 1.0 CE2 B:TYR569 4.9 25.3 1.0 CB B:MET540 4.9 7.4 1.0 C B:MET540 4.9 7.4 1.0 O B:THR643 4.9 17.3 1.0

Magnesium binding site 3 out of 8 in the Wzc-K540M-3YE-N711Y Mgadp C8


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Wzc-K540M-3YE-N711Y Mgadp C8 within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg1001 b:17.3 occ:1.00 O1B C:ADP1000 1.9 10.2 1.0 OG1 C:THR541 2.3 7.2 1.0 PB C:ADP1000 3.2 10.2 1.0 CB C:THR541 3.3 7.2 1.0 O3B C:ADP1000 3.4 10.2 1.0 N C:THR541 3.9 7.2 1.0 OD2 C:ASP642 4.1 5.7 1.0 O3A C:ADP1000 4.1 10.2 1.0 CA C:THR541 4.2 7.2 1.0 OD2 C:ASP564 4.3 8.1 1.0 CE C:MET540 4.3 7.6 1.0 O2B C:ADP1000 4.3 10.2 1.0 O2A C:ADP1000 4.3 10.2 1.0 CG2 C:THR541 4.4 7.2 1.0 PA C:ADP1000 4.6 10.2 1.0 OH B:TYR713 4.7 11.1 1.0 O1A C:ADP1000 4.7 10.2 1.0 OD1 C:ASP642 4.7 5.7 1.0 CG C:ASP642 4.8 5.7 1.0 CE2 C:TYR569 4.9 22.9 1.0 CB C:MET540 4.9 7.6 1.0 C C:MET540 4.9 7.6 1.0 O C:THR643 4.9 5.1 1.0

Magnesium binding site 4 out of 8 in the Wzc-K540M-3YE-N711Y Mgadp C8


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Wzc-K540M-3YE-N711Y Mgadp C8 within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg1001 b:17.3 occ:1.00 O1B D:ADP1000 1.9 6.5 1.0 OG1 D:THR541 2.3 7.5 1.0 PB D:ADP1000 3.2 6.5 1.0 CB D:THR541 3.3 7.5 1.0 O3B D:ADP1000 3.4 6.5 1.0 N D:THR541 3.9 7.5 1.0 OD2 D:ASP642 4.1 17.3 1.0 O3A D:ADP1000 4.1 6.5 1.0 CA D:THR541 4.2 7.5 1.0 OD2 D:ASP564 4.3 9.5 1.0 O2B D:ADP1000 4.3 6.5 1.0 O2A D:ADP1000 4.3 6.5 1.0 CG2 D:THR541 4.4 7.5 1.0 PA D:ADP1000 4.6 6.5 1.0 OH C:TYR713 4.6 15.0 1.0 O1A D:ADP1000 4.7 6.5 1.0 CE D:MET540 4.7 6.4 1.0 OD1 D:ASP642 4.7 17.3 1.0 CG D:ASP642 4.8 17.3 1.0 CE2 D:TYR569 4.9 25.2 1.0 CB D:MET540 4.9 6.4 1.0 C D:MET540 4.9 6.4 1.0 O D:THR643 4.9 5.1 1.0

Magnesium binding site 5 out of 8 in the Wzc-K540M-3YE-N711Y Mgadp C8


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Wzc-K540M-3YE-N711Y Mgadp C8 within 5.0Å range: probe atom residue distance (Å) B Occ E:Mg1001 b:17.3 occ:1.00 O1B E:ADP1000 1.9 7.8 1.0 OG1 E:THR541 2.3 6.2 1.0 PB E:ADP1000 3.2 7.8 1.0 CB E:THR541 3.3 6.2 1.0 O3B E:ADP1000 3.4 7.8 1.0 N E:THR541 3.9 6.2 1.0 CE E:MET540 4.0 6.0 1.0 OD2 E:ASP642 4.1 5.3 1.0 O3A E:ADP1000 4.1 7.8 1.0 CA E:THR541 4.2 6.2 1.0 OD2 E:ASP564 4.3 8.5 1.0 O2B E:ADP1000 4.3 7.8 1.0 O2A E:ADP1000 4.3 7.8 1.0 CG2 E:THR541 4.4 6.2 1.0 OH D:TYR713 4.5 12.2 1.0 PA E:ADP1000 4.6 7.8 1.0 O1A E:ADP1000 4.7 7.8 1.0 OD1 E:ASP642 4.7 5.3 1.0 CG E:ASP642 4.8 5.3 1.0 CE2 E:TYR569 4.9 22.6 1.0 CB E:MET540 4.9 6.0 1.0 C E:MET540 4.9 6.0 1.0 O E:THR643 4.9 4.3 1.0

Magnesium binding site 6 out of 8 in the Wzc-K540M-3YE-N711Y Mgadp C8


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Wzc-K540M-3YE-N711Y Mgadp C8 within 5.0Å range: probe atom residue distance (Å) B Occ F:Mg1001 b:17.3 occ:1.00 O1B F:ADP1000 1.9 7.8 1.0 OG1 F:THR541 2.3 8.5 1.0 PB F:ADP1000 3.2 7.8 1.0 CB F:THR541 3.3 8.5 1.0 O3B F:ADP1000 3.4 7.8 1.0 N F:THR541 3.9 8.5 1.0 OD2 F:ASP642 4.1 7.0 1.0 O3A F:ADP1000 4.1 7.8 1.0 CA F:THR541 4.2 8.5 1.0 OD2 F:ASP564 4.3 8.8 1.0 O2B F:ADP1000 4.3 7.8 1.0 O2A F:ADP1000 4.3 7.8 1.0 CG2 F:THR541 4.4 8.5 1.0 CE F:MET540 4.5 8.8 1.0 PA F:ADP1000 4.6 7.8 1.0 OH E:TYR713 4.7 13.2 1.0 O1A F:ADP1000 4.7 7.8 1.0 OD1 F:ASP642 4.7 7.0 1.0 CG F:ASP642 4.8 7.0 1.0 CE2 F:TYR569 4.9 24.2 1.0 CB F:MET540 4.9 8.8 1.0 C F:MET540 4.9 8.8 1.0 O F:THR643 4.9 9.4 1.0

Magnesium binding site 7 out of 8 in the Wzc-K540M-3YE-N711Y Mgadp C8


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Wzc-K540M-3YE-N711Y Mgadp C8 within 5.0Å range: probe atom residue distance (Å) B Occ G:Mg1001 b:17.3 occ:1.00 O1B G:ADP1000 1.9 12.2 1.0 OG1 G:THR541 2.3 7.6 1.0 PB G:ADP1000 3.2 12.2 1.0 CB G:THR541 3.3 7.6 1.0 O3B G:ADP1000 3.4 12.2 1.0 N G:THR541 3.9 7.6 1.0 OD2 G:ASP642 4.1 6.9 1.0 O3A G:ADP1000 4.1 12.2 1.0 CA G:THR541 4.2 7.6 1.0 OD2 G:ASP564 4.3 10.8 1.0 CE G:MET540 4.3 17.3 1.0 O2B G:ADP1000 4.3 12.2 1.0 O2A G:ADP1000 4.3 12.2 1.0 CG2 G:THR541 4.4 7.6 1.0 OH F:TYR713 4.5 10.4 1.0 PA G:ADP1000 4.6 12.2 1.0 O1A G:ADP1000 4.7 12.2 1.0 OD1 G:ASP642 4.7 6.9 1.0 CG G:ASP642 4.8 6.9 1.0 CE2 G:TYR569 4.9 23.7 1.0 CB G:MET540 4.9 17.3 1.0 C G:MET540 4.9 17.3 1.0 O G:THR643 4.9 17.3 1.0

Magnesium binding site 8 out of 8 in the Wzc-K540M-3YE-N711Y Mgadp C8


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Wzc-K540M-3YE-N711Y Mgadp C8 within 5.0Å range: probe atom residue distance (Å) B Occ H:Mg1001 b:17.3 occ:1.00 O1B H:ADP1000 1.9 6.4 1.0 OG1 H:THR541 2.3 4.5 1.0 PB H:ADP1000 3.2 6.4 1.0 CB H:THR541 3.3 4.5 1.0 O3B H:ADP1000 3.4 6.4 1.0 N H:THR541 3.9 4.5 1.0 OD2 H:ASP642 4.1 3.1 1.0 O3A H:ADP1000 4.1 6.4 1.0 CA H:THR541 4.2 4.5 1.0 OD2 H:ASP564 4.3 7.2 1.0 O2B H:ADP1000 4.3 6.4 1.0 O2A H:ADP1000 4.3 6.4 1.0 CG2 H:THR541 4.4 4.5 1.0 PA H:ADP1000 4.6 6.4 1.0 O1A H:ADP1000 4.7 6.4 1.0 CE H:MET540 4.7 5.0 1.0 OD1 H:ASP642 4.7 3.1 1.0 OH G:TYR713 4.7 14.3 1.0 CG H:ASP642 4.8 3.1 1.0 CE2 H:TYR569 4.9 26.3 1.0 CB H:MET540 4.9 5.0 1.0 C H:MET540 4.9 5.0 1.0 O H:THR643 4.9 4.4 1.0

Y.Yang, J.W.Liu. Bacterial Tyrosine Kinase Wzc To Be Published.