Magnesium in PDB 9fp0: Cryo-Em Structure of the 'Crown'Less Bcs Macrocomplex For E. Coli Cellulose Secretion in Non-Saturating C-Di-Gmp (Local)

Enzymatic activity of Cryo-Em Structure of the 'Crown'Less Bcs Macrocomplex For E. Coli Cellulose Secretion in Non-Saturating C-Di-Gmp (Local)

All present enzymatic activity of Cryo-Em Structure of the 'Crown'Less Bcs Macrocomplex For E. Coli Cellulose Secretion in Non-Saturating C-Di-Gmp (Local):
2.4.1.12;

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Cryo-Em Structure of the 'Crown'Less Bcs Macrocomplex For E. Coli Cellulose Secretion in Non-Saturating C-Di-Gmp (Local) (pdb code 9fp0). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Cryo-Em Structure of the 'Crown'Less Bcs Macrocomplex For E. Coli Cellulose Secretion in Non-Saturating C-Di-Gmp (Local), PDB code: 9fp0:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 9fp0

Go back to Magnesium Binding Sites List in 9fp0
Magnesium binding site 1 out of 2 in the Cryo-Em Structure of the 'Crown'Less Bcs Macrocomplex For E. Coli Cellulose Secretion in Non-Saturating C-Di-Gmp (Local)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of the 'Crown'Less Bcs Macrocomplex For E. Coli Cellulose Secretion in Non-Saturating C-Di-Gmp (Local) within 5.0Å range:
probe atom residue distance (Å) B Occ
Q:Mg302

b:45.5
occ:1.00
OG1 Q:THR16 2.1 50.0 1.0
O2B Q:ATP301 2.9 50.7 1.0
OD2 Q:ASP124 2.9 65.7 1.0
OD1 Q:ASP124 3.1 59.3 1.0
CG Q:ASP124 3.4 61.1 1.0
O3G Q:ATP301 3.4 56.3 1.0
CB Q:THR16 3.5 44.0 1.0
CB Q:CYS39 4.1 56.6 0.8
N Q:THR16 4.1 46.1 1.0
CA Q:THR16 4.2 42.4 1.0
SG Q:CYS39 4.3 75.7 0.8
PB Q:ATP301 4.3 41.8 1.0
CG2 Q:THR16 4.3 48.0 1.0
PG Q:ATP301 4.7 51.3 1.0
CB Q:THR15 4.8 47.3 1.0
O3B Q:ATP301 4.8 42.2 1.0
CB Q:ASP124 4.9 56.2 1.0
C Q:THR15 5.0 48.5 1.0
O1B Q:ATP301 5.0 46.2 1.0

Magnesium binding site 2 out of 2 in 9fp0

Go back to Magnesium Binding Sites List in 9fp0
Magnesium binding site 2 out of 2 in the Cryo-Em Structure of the 'Crown'Less Bcs Macrocomplex For E. Coli Cellulose Secretion in Non-Saturating C-Di-Gmp (Local)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Cryo-Em Structure of the 'Crown'Less Bcs Macrocomplex For E. Coli Cellulose Secretion in Non-Saturating C-Di-Gmp (Local) within 5.0Å range:
probe atom residue distance (Å) B Occ
W:Mg302

b:49.5
occ:1.00
O2B W:ATP301 1.9 44.7 1.0
O1G W:ATP301 1.9 56.7 1.0
PG W:ATP301 2.5 52.9 1.0
O2G W:ATP301 2.5 58.7 1.0
PB W:ATP301 2.9 38.8 1.0
O3B W:ATP301 2.9 44.8 1.0
OG1 W:THR16 3.0 50.2 1.0
O3A W:ATP301 3.8 36.9 1.0
O3G W:ATP301 3.9 49.6 1.0
O1B W:ATP301 4.1 46.5 1.0
CB W:THR16 4.2 42.4 1.0
SG W:CYS39 4.3 60.6 0.7
N W:THR16 4.7 38.9 1.0
ND2 Q:ASN152 4.7 44.9 1.0
OD2 W:ASP124 4.7 56.1 1.0
O2A W:ATP301 4.8 44.1 1.0
PA W:ATP301 4.8 37.5 1.0
NH2 Q:ARG156 4.9 51.6 1.0

Reference:

I.Anso, S.Zouhir, T.G.Sana, P.V.Krasteva. Structural Basis For Synthase Activation and Cellulose Modification in the E. Coli Type II Bcs Secretion System. Nat Commun 2024.
ISSN: ESSN 2041-1723
DOI: 10.1038/S41467-024-53113-8
Page generated: Thu Oct 31 22:33:34 2024

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