Magnesium in PDB 9g29: Yeast Rna Polymerase I Elongation Complex Stalled By An Apurinic Site with the C-Terminal of A12 in the Funnel

Enzymatic activity of Yeast Rna Polymerase I Elongation Complex Stalled By An Apurinic Site with the C-Terminal of A12 in the Funnel

Other elements in 9g29:

Magnesium Binding Sites:

Magnesium binding site 1 out of 1 in 9g29

Magnesium Binding Sites List in 9g29

Magnesium binding site 1 out of 1 in the Yeast Rna Polymerase I Elongation Complex Stalled By An Apurinic Site with the C-Terminal of A12 in the Funnel


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Yeast Rna Polymerase I Elongation Complex Stalled By An Apurinic Site with the C-Terminal of A12 in the Funnel within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1701 b:79.6 occ:1.00 OD1 A:ASP627 2.0 59.9 1.0 OD2 A:ASP627 2.0 79.6 1.0 OD1 A:ASP631 2.0 72.2 1.0 O3' R:G12 2.1 13.2 1.0 OD1 A:ASP629 2.1 74.2 1.0 OD2 A:ASP631 2.1 58.9 1.0 CG A:ASP627 2.2 67.3 1.0 CG A:ASP631 2.3 63.3 1.0 CG A:ASP629 3.3 72.2 1.0 C3' R:G12 3.3 11.3 1.0 CB A:ASP627 3.6 59.0 1.0 C4' R:G12 3.7 12.1 1.0 CB A:ASP631 3.8 54.6 1.0 OD2 A:ASP629 3.8 75.2 1.0 O2' R:G12 4.0 16.7 1.0 N A:ASP627 4.0 55.0 1.0 C5' R:G12 4.1 13.6 1.0 N A:ASP631 4.2 60.4 1.0 CA A:ASP627 4.2 55.7 1.0 C2' R:G12 4.2 12.4 1.0 C A:ASP627 4.2 55.1 1.0 N A:ASP629 4.3 67.5 1.0 O A:ASP627 4.3 60.0 1.0 CA A:ASP631 4.4 52.9 1.0 CB A:ASP629 4.5 68.7 1.0 C A:ASP629 4.5 65.5 1.0 O A:ASP629 4.6 67.4 1.0 CA A:ASP629 4.7 68.2 1.0 N A:PHE628 4.8 51.0 1.0 NH2 A:ARG591 4.9 55.0 1.0 N A:GLY630 4.9 59.6 1.0

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