Magnesium in PDB 9gzm: Cryo-Em Structure of the Human Mitochondrial Rna Polymerase Transcription Initiation Complex (Polrmt/Tfam/TFB2M/Dna/Rna) with A 2-Mer Rna (Pppgpa) and Gtp Poised For Catalysis (Pre-IC3)

Enzymatic activity of Cryo-Em Structure of the Human Mitochondrial Rna Polymerase Transcription Initiation Complex (Polrmt/Tfam/TFB2M/Dna/Rna) with A 2-Mer Rna (Pppgpa) and Gtp Poised For Catalysis (Pre-IC3)

Magnesium Binding Sites:

Magnesium binding site 1 out of 1 in 9gzm

Magnesium Binding Sites List in 9gzm

Magnesium binding site 1 out of 1 in the Cryo-Em Structure of the Human Mitochondrial Rna Polymerase Transcription Initiation Complex (Polrmt/Tfam/TFB2M/Dna/Rna) with A 2-Mer Rna (Pppgpa) and Gtp Poised For Catalysis (Pre-IC3)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of the Human Mitochondrial Rna Polymerase Transcription Initiation Complex (Polrmt/Tfam/TFB2M/Dna/Rna) with A 2-Mer Rna (Pppgpa) and Gtp Poised For Catalysis (Pre-IC3) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1302 b:53.8 occ:1.00 OD1 A:ASP922 2.2 43.6 1.0 OD2 A:ASP1151 2.3 42.6 1.0 O3G A:GTP1301 2.4 55.2 1.0 O2A A:GTP1301 2.4 55.2 1.0 O2B A:GTP1301 2.4 55.2 1.0 O A:GLY923 2.6 44.0 1.0 CG A:ASP922 3.1 43.6 1.0 OD2 A:ASP922 3.3 43.6 1.0 PB A:GTP1301 3.4 55.2 1.0 O3A A:GTP1301 3.4 55.2 1.0 CG A:ASP1151 3.4 42.6 1.0 PA A:GTP1301 3.5 55.2 1.0 PG A:GTP1301 3.7 55.2 1.0 C A:GLY923 3.7 44.0 1.0 O3B A:GTP1301 3.8 55.2 1.0 N A:GLY923 3.9 44.0 1.0 OD1 A:ASP1151 3.9 42.6 1.0 C5' A:GTP1301 4.3 55.2 1.0 CA A:GLY923 4.4 44.0 1.0 O5' A:GTP1301 4.4 55.2 1.0 O1G A:GTP1301 4.4 55.2 1.0 CB A:ASP922 4.5 43.6 1.0 CB A:ASP1151 4.6 42.6 1.0 O1A A:GTP1301 4.6 55.2 1.0 N A:SER924 4.7 45.4 1.0 O2G A:GTP1301 4.8 55.2 1.0 O1B A:GTP1301 4.8 55.2 1.0 C A:ASP922 4.8 43.6 1.0 CA A:SER924 4.9 45.4 1.0

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