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Magnesium in PDB 9itk: Chloroflexus Aurantiacus Atp Synthase, State 2

Enzymatic activity of Chloroflexus Aurantiacus Atp Synthase, State 2

All present enzymatic activity of Chloroflexus Aurantiacus Atp Synthase, State 2:
7.1.2.2;

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Chloroflexus Aurantiacus Atp Synthase, State 2 (pdb code 9itk). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the Chloroflexus Aurantiacus Atp Synthase, State 2, PDB code: 9itk:
Jump to Magnesium binding site number: 1; 2; 3;

Magnesium binding site 1 out of 3 in 9itk

Go back to Magnesium Binding Sites List in 9itk
Magnesium binding site 1 out of 3 in the Chloroflexus Aurantiacus Atp Synthase, State 2


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Chloroflexus Aurantiacus Atp Synthase, State 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg601

b:107.8
occ:1.00
O3G A:ATP602 2.0 108.7 1.0
OG1 A:THR183 2.0 102.5 1.0
O3B A:ATP602 2.0 108.7 1.0
O2B A:ATP602 2.1 108.7 1.0
PB A:ATP602 2.4 108.7 1.0
PG A:ATP602 2.5 108.7 1.0
O3A A:ATP602 2.8 108.7 1.0
CB A:THR183 3.0 102.5 1.0
O1G A:ATP602 3.5 108.7 1.0
N A:THR183 3.6 102.5 1.0
O2G A:ATP602 3.6 108.7 1.0
O1B A:ATP602 3.8 108.7 1.0
PA A:ATP602 3.8 108.7 1.0
CA A:THR183 3.9 102.5 1.0
O2A A:ATP602 4.0 108.7 1.0
CG2 A:THR183 4.1 102.5 1.0
O1A A:ATP602 4.2 108.7 1.0
CE A:LYS182 4.6 99.1 1.0
NZ A:LYS182 4.7 99.1 1.0
C A:LYS182 4.7 99.1 1.0
N A:LYS182 4.8 99.1 1.0
O A:ARG178 4.8 99.6 1.0
CB A:LYS182 5.0 99.1 1.0

Magnesium binding site 2 out of 3 in 9itk

Go back to Magnesium Binding Sites List in 9itk
Magnesium binding site 2 out of 3 in the Chloroflexus Aurantiacus Atp Synthase, State 2


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Chloroflexus Aurantiacus Atp Synthase, State 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg601

b:55.6
occ:1.00
O2B B:ATP602 1.9 65.9 1.0
OG1 B:THR183 2.0 54.7 1.0
O1G B:ATP602 2.8 65.9 1.0
CB B:THR183 3.2 54.7 1.0
PB B:ATP602 3.4 65.9 1.0
OD1 B:ASP276 3.6 53.0 1.0
NE2 B:GLN207 3.6 51.7 1.0
CG2 B:THR183 3.8 54.7 1.0
O3B B:ATP602 3.9 65.9 1.0
PG B:ATP602 3.9 65.9 1.0
O3A B:ATP602 4.0 65.9 1.0
CA B:THR183 4.4 54.7 1.0
CG B:ASP276 4.4 53.0 1.0
O1B B:ATP602 4.5 65.9 1.0
N B:THR183 4.5 54.7 1.0
OD2 B:ASP276 4.5 53.0 1.0
NE2 B:GLN211 4.6 53.6 1.0
CD B:GLN207 4.6 51.7 1.0
O3G B:ATP602 4.7 65.9 1.0
OH B:TYR202 4.8 41.3 1.0
O B:ASP276 4.9 53.0 1.0

Magnesium binding site 3 out of 3 in 9itk

Go back to Magnesium Binding Sites List in 9itk
Magnesium binding site 3 out of 3 in the Chloroflexus Aurantiacus Atp Synthase, State 2


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Chloroflexus Aurantiacus Atp Synthase, State 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg601

b:75.8
occ:1.00
O2B C:ATP602 2.0 82.5 1.0
O1G C:ATP602 2.0 82.5 1.0
CG2 C:THR183 3.1 65.3 1.0
PG C:ATP602 3.2 82.5 1.0
PB C:ATP602 3.2 82.5 1.0
CB C:THR183 3.3 65.3 1.0
O3B C:ATP602 3.4 82.5 1.0
NE2 C:GLN207 3.8 60.0 1.0
O3G C:ATP602 4.0 82.5 1.0
N C:THR183 4.1 65.3 1.0
O1B C:ATP602 4.2 82.5 1.0
OE1 C:GLN207 4.2 60.0 1.0
O3A C:ATP602 4.2 82.5 1.0
OG1 C:THR183 4.3 65.3 1.0
OD2 C:ASP276 4.3 55.3 1.0
CA C:THR183 4.3 65.3 1.0
O1A C:ATP602 4.4 82.5 1.0
O2G C:ATP602 4.4 82.5 1.0
CD C:GLN207 4.4 60.0 1.0
OD1 C:ASP276 4.6 55.3 1.0
PA C:ATP602 4.7 82.5 1.0
CG C:ASP276 4.8 55.3 1.0
O2A C:ATP602 4.8 82.5 1.0

Reference:

X.Zhang, J.Wu, X.Xu. An Atp Synthase From the Early Photosynthetic Prokaryote Chloroflexus Aurantiacus Has Two Proton-Translocating A-Subunits To Be Published.
Page generated: Sat Aug 16 04:28:21 2025

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