Magnesium in PDB 9mn6: Structure of the Human Mitochondrial Late-Stage Transcription Initiation Complex, IC8

All present enzymatic activity of Structure of the Human Mitochondrial Late-Stage Transcription Initiation Complex, IC8:
2.7.7.6;

The binding sites of Magnesium atom in the Structure of the Human Mitochondrial Late-Stage Transcription Initiation Complex, IC8 (pdb code 9mn6). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of the Human Mitochondrial Late-Stage Transcription Initiation Complex, IC8, PDB code: 9mn6:

Magnesium binding site 1 out of 1 in the Structure of the Human Mitochondrial Late-Stage Transcription Initiation Complex, IC8


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Human Mitochondrial Late-Stage Transcription Initiation Complex, IC8 within 5.0Å range: probe atom residue distance (Å) B Occ E:Mg1302 b:20.0 occ:1.00 O E:GLY923 2.0 93.0 1.0 O2A E:ATP1301 2.0 20.0 1.0 OD2 E:ASP922 2.1 82.5 1.0 CG E:ASP922 2.7 90.3 1.0 OD1 E:ASP922 2.8 85.3 1.0 O1G E:ATP1301 2.9 20.0 1.0 OD2 E:ASP1151 3.0 83.5 1.0 O2B E:ATP1301 3.1 20.0 1.0 C E:GLY923 3.1 96.1 1.0 N E:GLY923 3.3 96.8 1.0 CG E:ASP1151 3.4 90.9 1.0 PA E:ATP1301 3.5 20.0 1.0 OD1 E:ASP1151 3.5 85.4 1.0 CA E:GLY923 3.6 96.3 1.0 PG E:ATP1301 4.0 20.0 1.0 CB E:ASP922 4.0 95.2 1.0 C E:ASP922 4.0 97.3 1.0 PB E:ATP1301 4.1 20.0 1.0 O3A E:ATP1301 4.1 20.0 1.0 O E:ASP1151 4.1 93.8 1.0 O5' E:ATP1301 4.2 20.0 1.0 O3B E:ATP1301 4.3 20.0 1.0 N E:SER924 4.3 93.2 1.0 O3G E:ATP1301 4.4 20.0 1.0 CA E:ASP922 4.4 97.2 1.0 CB E:ASP1151 4.5 93.2 1.0 O1A E:ATP1301 4.5 20.0 1.0 CA E:SER924 4.7 92.8 1.0 O E:ASP922 4.8 95.1 1.0 C5' E:ATP1301 5.0 20.0 1.0

K.Herbine, A.R.Nayak, A.Zamudio-Ochoa, D.Temiakov. Structural Basis For Promoter Recognition and Transcription Factor Binding and Release in Human Mitochondria. Mol.Cell 2025.
ISSN: ISSN 1097-2765
PubMed: 40712587
DOI: 10.1016/J.MOLCEL.2025.06.016