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Magnesium in PDB 9mok: Structure of Native Murine Cardiac Thin Filament at Pca=5.8 in CA2+- Free Rotated State (Upper Strand)

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of Native Murine Cardiac Thin Filament at Pca=5.8 in CA2+- Free Rotated State (Upper Strand) (pdb code 9mok). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 7 binding sites of Magnesium where determined in the Structure of Native Murine Cardiac Thin Filament at Pca=5.8 in CA2+- Free Rotated State (Upper Strand), PDB code: 9mok:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7;

Magnesium binding site 1 out of 7 in 9mok

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Magnesium binding site 1 out of 7 in the Structure of Native Murine Cardiac Thin Filament at Pca=5.8 in CA2+- Free Rotated State (Upper Strand)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Native Murine Cardiac Thin Filament at Pca=5.8 in CA2+- Free Rotated State (Upper Strand) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg402

b:8.0
occ:1.00
O1B A:ADP401 2.0 12.0 1.0
OE1 A:GLN137 2.8 13.6 1.0
PB A:ADP401 3.3 12.0 1.0
O2B A:ADP401 3.7 12.0 1.0
CD A:GLN137 3.7 13.6 1.0
OD2 A:ASP154 3.8 8.8 1.0
NE2 A:GLN137 4.0 13.6 1.0
O3B A:ADP401 4.2 12.0 1.0
O3A A:ADP401 4.3 12.0 1.0
O1A A:ADP401 4.4 12.0 1.0
NZ A:LYS18 4.4 11.4 1.0
OD1 A:ASP154 4.4 8.8 1.0
CG2 A:VAL339 4.5 10.7 1.0
CG A:ASP154 4.6 8.8 1.0
CA A:GLY156 4.7 9.1 1.0
OD2 A:ASP11 4.8 14.5 1.0
CB A:VAL339 4.9 10.7 1.0
CG A:GLN137 4.9 13.6 1.0
PA A:ADP401 5.0 12.0 1.0

Magnesium binding site 2 out of 7 in 9mok

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Magnesium binding site 2 out of 7 in the Structure of Native Murine Cardiac Thin Filament at Pca=5.8 in CA2+- Free Rotated State (Upper Strand)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of Native Murine Cardiac Thin Filament at Pca=5.8 in CA2+- Free Rotated State (Upper Strand) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg402

b:8.0
occ:1.00
O1B B:ADP401 2.0 12.0 1.0
OE1 B:GLN137 2.8 13.6 1.0
PB B:ADP401 3.3 12.0 1.0
O2B B:ADP401 3.7 12.0 1.0
CD B:GLN137 3.7 13.6 1.0
OD2 B:ASP154 3.8 8.8 1.0
NE2 B:GLN137 4.0 13.6 1.0
O3B B:ADP401 4.2 12.0 1.0
O3A B:ADP401 4.3 12.0 1.0
O1A B:ADP401 4.4 12.0 1.0
NZ B:LYS18 4.4 11.4 1.0
OD1 B:ASP154 4.4 8.8 1.0
CG2 B:VAL339 4.5 10.7 1.0
CG B:ASP154 4.6 8.8 1.0
CA B:GLY156 4.7 9.1 1.0
OD2 B:ASP11 4.8 14.5 1.0
CB B:VAL339 4.9 10.7 1.0
CG B:GLN137 4.9 13.6 1.0
PA B:ADP401 5.0 12.0 1.0

Magnesium binding site 3 out of 7 in 9mok

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Magnesium binding site 3 out of 7 in the Structure of Native Murine Cardiac Thin Filament at Pca=5.8 in CA2+- Free Rotated State (Upper Strand)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Structure of Native Murine Cardiac Thin Filament at Pca=5.8 in CA2+- Free Rotated State (Upper Strand) within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg402

b:8.0
occ:1.00
O1B C:ADP401 2.0 12.0 1.0
OE1 C:GLN137 2.8 13.6 1.0
PB C:ADP401 3.3 12.0 1.0
CD C:GLN137 3.7 13.6 1.0
O2B C:ADP401 3.7 12.0 1.0
OD2 C:ASP154 3.8 8.8 1.0
NE2 C:GLN137 4.0 13.6 1.0
O3B C:ADP401 4.2 12.0 1.0
O3A C:ADP401 4.3 12.0 1.0
O1A C:ADP401 4.4 12.0 1.0
NZ C:LYS18 4.4 11.4 1.0
OD1 C:ASP154 4.4 8.8 1.0
CG2 C:VAL339 4.5 10.7 1.0
CG C:ASP154 4.6 8.8 1.0
CA C:GLY156 4.7 9.1 1.0
OD2 C:ASP11 4.8 14.5 1.0
CB C:VAL339 4.9 10.7 1.0
CG C:GLN137 4.9 13.6 1.0
PA C:ADP401 5.0 12.0 1.0

Magnesium binding site 4 out of 7 in 9mok

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Magnesium binding site 4 out of 7 in the Structure of Native Murine Cardiac Thin Filament at Pca=5.8 in CA2+- Free Rotated State (Upper Strand)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Structure of Native Murine Cardiac Thin Filament at Pca=5.8 in CA2+- Free Rotated State (Upper Strand) within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg402

b:8.0
occ:1.00
O1B D:ADP401 2.0 12.0 1.0
OE1 D:GLN137 2.8 13.6 1.0
PB D:ADP401 3.3 12.0 1.0
O2B D:ADP401 3.7 12.0 1.0
CD D:GLN137 3.7 13.6 1.0
OD2 D:ASP154 3.8 8.8 1.0
NE2 D:GLN137 4.0 13.6 1.0
O3B D:ADP401 4.2 12.0 1.0
O3A D:ADP401 4.3 12.0 1.0
O1A D:ADP401 4.4 12.0 1.0
NZ D:LYS18 4.4 11.4 1.0
OD1 D:ASP154 4.4 8.8 1.0
CG2 D:VAL339 4.5 10.7 1.0
CG D:ASP154 4.6 8.8 1.0
CA D:GLY156 4.7 9.1 1.0
OD2 D:ASP11 4.8 14.5 1.0
CB D:VAL339 4.9 10.7 1.0
CG D:GLN137 4.9 13.6 1.0
PA D:ADP401 5.0 12.0 1.0

Magnesium binding site 5 out of 7 in 9mok

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Magnesium binding site 5 out of 7 in the Structure of Native Murine Cardiac Thin Filament at Pca=5.8 in CA2+- Free Rotated State (Upper Strand)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Structure of Native Murine Cardiac Thin Filament at Pca=5.8 in CA2+- Free Rotated State (Upper Strand) within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Mg402

b:8.0
occ:1.00
O1B E:ADP401 2.0 12.0 1.0
OE1 E:GLN137 2.8 13.6 1.0
PB E:ADP401 3.3 12.0 1.0
CD E:GLN137 3.7 13.6 1.0
O2B E:ADP401 3.7 12.0 1.0
OD2 E:ASP154 3.8 8.8 1.0
NE2 E:GLN137 4.0 13.6 1.0
O3B E:ADP401 4.2 12.0 1.0
O3A E:ADP401 4.3 12.0 1.0
O1A E:ADP401 4.4 12.0 1.0
NZ E:LYS18 4.4 11.4 1.0
OD1 E:ASP154 4.4 8.8 1.0
CG2 E:VAL339 4.5 10.7 1.0
CG E:ASP154 4.6 8.8 1.0
CA E:GLY156 4.7 9.1 1.0
OD2 E:ASP11 4.8 14.5 1.0
CB E:VAL339 4.9 10.7 1.0
CG E:GLN137 4.9 13.6 1.0
PA E:ADP401 5.0 12.0 1.0

Magnesium binding site 6 out of 7 in 9mok

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Magnesium binding site 6 out of 7 in the Structure of Native Murine Cardiac Thin Filament at Pca=5.8 in CA2+- Free Rotated State (Upper Strand)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Structure of Native Murine Cardiac Thin Filament at Pca=5.8 in CA2+- Free Rotated State (Upper Strand) within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Mg402

b:8.0
occ:1.00
O1B F:ADP401 2.0 12.0 1.0
OE1 F:GLN137 2.8 13.6 1.0
PB F:ADP401 3.3 12.0 1.0
CD F:GLN137 3.7 13.6 1.0
O2B F:ADP401 3.7 12.0 1.0
OD2 F:ASP154 3.8 8.8 1.0
NE2 F:GLN137 4.0 13.6 1.0
O3B F:ADP401 4.2 12.0 1.0
O3A F:ADP401 4.3 12.0 1.0
O1A F:ADP401 4.4 12.0 1.0
NZ F:LYS18 4.4 11.4 1.0
OD1 F:ASP154 4.4 8.8 1.0
CG2 F:VAL339 4.5 10.7 1.0
CG F:ASP154 4.6 8.8 1.0
CA F:GLY156 4.7 9.1 1.0
OD2 F:ASP11 4.8 14.5 1.0
CB F:VAL339 4.9 10.7 1.0
CG F:GLN137 4.9 13.6 1.0
PA F:ADP401 5.0 12.0 1.0

Magnesium binding site 7 out of 7 in 9mok

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Magnesium binding site 7 out of 7 in the Structure of Native Murine Cardiac Thin Filament at Pca=5.8 in CA2+- Free Rotated State (Upper Strand)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Structure of Native Murine Cardiac Thin Filament at Pca=5.8 in CA2+- Free Rotated State (Upper Strand) within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Mg402

b:8.0
occ:1.00
O1B G:ADP401 2.0 12.0 1.0
OE1 G:GLN137 2.8 13.6 1.0
PB G:ADP401 3.3 12.0 1.0
CD G:GLN137 3.7 13.6 1.0
O2B G:ADP401 3.7 12.0 1.0
OD2 G:ASP154 3.8 8.8 1.0
NE2 G:GLN137 4.0 13.6 1.0
O3B G:ADP401 4.2 12.0 1.0
O3A G:ADP401 4.3 12.0 1.0
O1A G:ADP401 4.4 12.0 1.0
NZ G:LYS18 4.4 11.4 1.0
OD1 G:ASP154 4.5 8.8 1.0
CG2 G:VAL339 4.5 10.7 1.0
CG G:ASP154 4.6 8.8 1.0
CA G:GLY156 4.7 9.1 1.0
OD2 G:ASP11 4.8 14.5 1.0
CB G:VAL339 4.9 10.7 1.0
CG G:GLN137 4.9 13.6 1.0
PA G:ADP401 5.0 12.0 1.0

Reference:

C.M.Risi, V.E.Galkin. Structure of Native Murine Cardiac Thin Filament at Pca=5.8 in CA2+-Free Rotated State (Upper Strand) To Be Published.
Page generated: Sat Aug 16 06:40:26 2025

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