Magnesium in PDB 9nbm: Open Conformation of Arsa From L. Ferriphilum in Complex with Mgadp Determined in Absence of Arsenite

The binding sites of Magnesium atom in the Open Conformation of Arsa From L. Ferriphilum in Complex with Mgadp Determined in Absence of Arsenite (pdb code 9nbm). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Open Conformation of Arsa From L. Ferriphilum in Complex with Mgadp Determined in Absence of Arsenite, PDB code: 9nbm:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Open Conformation of Arsa From L. Ferriphilum in Complex with Mgadp Determined in Absence of Arsenite


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Open Conformation of Arsa From L. Ferriphilum in Complex with Mgadp Determined in Absence of Arsenite within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg603 b:69.0 occ:1.00 O3B A:ADP601 2.0 80.3 1.0 PB A:ADP601 2.6 80.3 1.0 OG1 A:THR341 2.7 77.4 1.0 O1B A:ADP601 2.9 80.3 1.0 O2B A:ADP601 3.1 80.3 1.0 OD2 A:ASP447 3.3 75.1 1.0 O3A A:ADP601 4.1 80.3 1.0 CB A:THR341 4.1 77.4 1.0 CG A:ASP447 4.2 75.1 1.0 OD1 A:ASP364 4.3 88.0 1.0 OD1 A:ASP447 4.4 75.1 1.0 N A:THR341 4.5 77.4 1.0 O2A A:ADP601 4.5 80.3 1.0 OG1 A:THR448 4.6 75.0 1.0 PA A:ADP601 4.7 80.3 1.0 CB A:ASP364 4.7 88.0 1.0 CE A:LYS340 4.8 73.5 1.0 O1A A:ADP601 4.8 80.3 1.0 O A:SER363 4.8 81.9 1.0 CA A:THR341 4.9 77.4 1.0 CG2 A:THR341 4.9 77.4 1.0 CG A:ASP364 4.9 88.0 1.0 OG A:SER363 5.0 81.9 1.0

Magnesium binding site 2 out of 2 in the Open Conformation of Arsa From L. Ferriphilum in Complex with Mgadp Determined in Absence of Arsenite


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Open Conformation of Arsa From L. Ferriphilum in Complex with Mgadp Determined in Absence of Arsenite within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg604 b:59.7 occ:1.00 O1B A:ADP602 1.9 77.3 1.0 OG1 A:THR23 2.5 74.2 1.0 PB A:ADP602 3.0 77.3 1.0 O2B A:ADP602 3.1 77.3 1.0 CB A:THR23 3.8 74.2 1.0 O3B A:ADP602 3.9 77.3 1.0 O2A A:ADP602 3.9 77.3 1.0 O3A A:ADP602 4.2 77.3 1.0 N A:THR23 4.3 74.2 1.0 OD2 A:ASP143 4.3 72.1 1.0 NZ A:LYS22 4.3 68.7 1.0 PA A:ADP602 4.4 77.3 1.0 CB A:ASP46 4.6 88.2 1.0 CA A:THR23 4.6 74.2 1.0 OG1 A:THR503 4.7 78.7 1.0 O1A A:ADP602 4.7 77.3 1.0 OD2 A:ASP46 4.7 88.2 1.0 CG2 A:THR23 4.7 74.2 1.0 CG2 A:THR503 4.9 78.7 1.0 CG A:ASP143 4.9 72.1 1.0

S.Mahajan, A.E.Pall, Y.E.Li, T.L.Stemmler, D.C.Rees, W.M.Clemons Jr.. Nucleotide- and Metalloid-Driven Conformational Changes in the Arsenite Efflux Atpase Arsa To Be Published.