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Magnesium in PDB 9ovi: Crystal Structure of SH3-LIKE_BAC-Type Domain (79-145) of Conserved Domain Protein GBAA_2967 From Bacillus Anthracis Ames Ancestor

Protein crystallography data

The structure of Crystal Structure of SH3-LIKE_BAC-Type Domain (79-145) of Conserved Domain Protein GBAA_2967 From Bacillus Anthracis Ames Ancestor, PDB code: 9ovi was solved by G.Minasov, I.Dubrovska, J.Winsor, K.J.F.Satchell, Center For Structuralbiology Of Infectious Diseases (Csbid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.42 / 1.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 36.281, 50.276, 84.602, 90, 90, 90
R / Rfree (%) 16.4 / 18.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of SH3-LIKE_BAC-Type Domain (79-145) of Conserved Domain Protein GBAA_2967 From Bacillus Anthracis Ames Ancestor (pdb code 9ovi). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of SH3-LIKE_BAC-Type Domain (79-145) of Conserved Domain Protein GBAA_2967 From Bacillus Anthracis Ames Ancestor, PDB code: 9ovi:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 9ovi

Go back to Magnesium Binding Sites List in 9ovi
Magnesium binding site 1 out of 2 in the Crystal Structure of SH3-LIKE_BAC-Type Domain (79-145) of Conserved Domain Protein GBAA_2967 From Bacillus Anthracis Ames Ancestor


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of SH3-LIKE_BAC-Type Domain (79-145) of Conserved Domain Protein GBAA_2967 From Bacillus Anthracis Ames Ancestor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg201

b:24.9
occ:1.00
O A:HOH337 2.0 17.0 1.0
O A:HOH398 2.1 23.2 1.0
O A:HOH397 2.1 32.6 1.0
O A:HOH338 2.1 24.8 1.0
O A:HOH312 4.2 38.7 1.0
OE1 A:GLU97 4.2 15.7 1.0
O A:HOH373 4.3 40.7 1.0
OH A:TYR135 4.3 14.0 1.0
OE2 A:GLU97 4.4 18.6 1.0
CD A:GLU97 4.8 15.1 1.0
CG2 A:THR133 4.8 14.5 1.0
O A:HOH321 4.9 24.0 1.0

Magnesium binding site 2 out of 2 in 9ovi

Go back to Magnesium Binding Sites List in 9ovi
Magnesium binding site 2 out of 2 in the Crystal Structure of SH3-LIKE_BAC-Type Domain (79-145) of Conserved Domain Protein GBAA_2967 From Bacillus Anthracis Ames Ancestor


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of SH3-LIKE_BAC-Type Domain (79-145) of Conserved Domain Protein GBAA_2967 From Bacillus Anthracis Ames Ancestor within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg201

b:34.9
occ:1.00
O B:HOH375 1.8 41.6 1.0
O B:HOH311 2.0 17.2 0.6
O B:HOH365 2.0 37.7 1.0
O B:HOH361 2.1 42.7 1.0
O B:HOH311 2.2 24.6 0.4
O B:HOH326 3.9 33.1 1.0
OD1 B:ASP83 4.1 19.6 1.0
OD2 B:ASP83 4.1 23.5 1.0
CG B:ASP83 4.4 19.8 1.0
O B:HOH356 4.5 30.2 1.0
O B:HOH313 4.5 31.3 1.0
O B:THR81 4.8 23.8 1.0
ND2 B:ASN118 4.9 26.5 1.0

Reference:

G.Minasov, I.Dubrovska, J.Winsor, K.J.F.Satchell, Center For Structural Biology Of Infectious Diseases (Csbid). Crystal Structure of SH3-LIKE_BAC-Type Domain (79-145) of Conserved Domain Protein GBAA_2967 From Bacillus Anthracis Ames Ancestor. To Be Published.
Page generated: Sat Aug 16 07:09:23 2025

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