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Magnesium in PDB 1hxi: An Unexpected Extended Conformation For the Third Tpr Motif of the Peroxin PEX5 From Trypanosoma Brucei

Protein crystallography data

The structure of An Unexpected Extended Conformation For the Third Tpr Motif of the Peroxin PEX5 From Trypanosoma Brucei, PDB code: 1hxi was solved by A.Kumar, C.Roach, I.S.Hirsh, S.Turley, S.Dewalque, P.A.M.Michels, W.G.J.Hol, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.60
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 75.000, 75.000, 56.010, 90.00, 90.00, 120.00
R / Rfree (%) 18.6 / 22.3

Magnesium Binding Sites:

The binding sites of Magnesium atom in the An Unexpected Extended Conformation For the Third Tpr Motif of the Peroxin PEX5 From Trypanosoma Brucei (pdb code 1hxi). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the An Unexpected Extended Conformation For the Third Tpr Motif of the Peroxin PEX5 From Trypanosoma Brucei, PDB code: 1hxi:

Magnesium binding site 1 out of 1 in 1hxi

Go back to Magnesium Binding Sites List in 1hxi
Magnesium binding site 1 out of 1 in the An Unexpected Extended Conformation For the Third Tpr Motif of the Peroxin PEX5 From Trypanosoma Brucei


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of An Unexpected Extended Conformation For the Third Tpr Motif of the Peroxin PEX5 From Trypanosoma Brucei within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1

b:17.0
occ:1.00
O A:HOH455 2.0 16.2 1.0
OE1 A:GLU397 2.0 16.3 1.0
O A:HOH456 2.1 25.1 1.0
O A:HOH458 2.1 21.0 1.0
O A:HOH454 2.1 18.6 1.0
O A:HOH457 2.1 19.3 1.0
CD A:GLU397 3.2 18.4 1.0
OE2 A:GLU397 3.7 20.6 1.0
O A:ALA394 4.1 16.4 1.0
O A:HOH540 4.2 26.8 1.0
O A:HOH506 4.3 20.1 1.0
OD1 A:ASP399 4.3 20.2 1.0
CA A:GLU397 4.3 15.5 1.0
CG A:GLU397 4.3 16.1 1.0
ND2 A:ASN429 4.5 20.8 1.0
CB A:GLU397 4.5 17.9 1.0
O A:HOH532 4.6 31.8 1.0
CG A:ASN429 4.7 19.9 1.0
N A:GLU397 4.8 13.4 1.0

Reference:

A.Kumar, C.Roach, I.S.Hirsh, S.Turley, S.Dewalque, P.A.Michels, W.G.Hol. An Unexpected Extended Conformation For the Third Tpr Motif of the Peroxin PEX5 From Trypanosoma Brucei. J.Mol.Biol. V. 307 271 2001.
ISSN: ISSN 0022-2836
PubMed: 11243819
DOI: 10.1006/JMBI.2000.4465
Page generated: Tue Aug 13 04:33:07 2024

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