Magnesium in PDB 1jgr: Crystal Structure Analysis of the B-Dna Dodecamer Cgcgaattcgcg with Thallium Ions.

The structure of Crystal Structure Analysis of the B-Dna Dodecamer Cgcgaattcgcg with Thallium Ions., PDB code: 1jgr was solved by S.B.Howerton, C.C.Sines, D.Vanderveer, L.D.Williams, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	10.00 / 1.20
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	25.944, 40.744, 66.202, 90.00, 90.00, 90.00
R / Rfree (%)	16.3 / 22.2

The structure of Crystal Structure Analysis of the B-Dna Dodecamer Cgcgaattcgcg with Thallium Ions. also contains other interesting chemical elements:

Thallium

(Tl)

13 atoms

The binding sites of Magnesium atom in the Crystal Structure Analysis of the B-Dna Dodecamer Cgcgaattcgcg with Thallium Ions. (pdb code 1jgr). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure Analysis of the B-Dna Dodecamer Cgcgaattcgcg with Thallium Ions., PDB code: 1jgr:

Magnesium binding site 1 out of 1 in the Crystal Structure Analysis of the B-Dna Dodecamer Cgcgaattcgcg with Thallium Ions.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure Analysis of the B-Dna Dodecamer Cgcgaattcgcg with Thallium Ions. within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg2013 b:18.1 occ:0.80 TL A:TL2108 2.0 62.7 0.1 O A:HOH3137 2.1 17.1 0.8 O B:HOH3135 2.1 18.3 0.8 O A:HOH3139 2.1 19.9 0.8 O B:HOH3140 2.1 17.3 0.8 O A:HOH3138 2.1 20.2 0.8 O A:HOH3136 2.1 17.0 0.8 TL B:TL2107 2.5 26.0 0.1 O A:HOH3011 4.2 26.3 1.0 O B:HOH3008 4.2 24.9 1.0 O A:HOH3034 4.3 24.4 1.0 O6 B:DG2010 4.3 18.9 1.0 O A:HOH3007 4.4 21.8 1.0 O A:HOH3018 4.4 25.3 1.0 O6 A:DG1002 4.4 16.0 1.0 C5 A:DC1001 4.5 16.6 1.0 O B:HOH3029 4.5 26.4 1.0 N7 A:DG1002 4.5 17.4 1.0 C6 A:DC1001 4.8 17.3 1.0

S.B.Howerton, C.C.Sines, D.Vanderveer, L.D.Williams. Locating Monovalent Cations in the Grooves of B-Dna. Biochemistry V. 40 10023 2001.
ISSN: ISSN 0006-2960
PubMed: 11513580
DOI: 10.1021/BI010391+