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Magnesium in PDB 1jj7: Crystal Structure of the C-Terminal Atpase Domain of Human TAP1

Protein crystallography data

The structure of Crystal Structure of the C-Terminal Atpase Domain of Human TAP1, PDB code: 1jj7 was solved by R.Gaudet, D.C.Wiley, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 2.40
Space group P 62
Cell size a, b, c (Å), α, β, γ (°) 87.570, 87.570, 79.850, 90.00, 90.00, 120.00
R / Rfree (%) 19.8 / 24

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the C-Terminal Atpase Domain of Human TAP1 (pdb code 1jj7). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the C-Terminal Atpase Domain of Human TAP1, PDB code: 1jj7:

Magnesium binding site 1 out of 1 in 1jj7

Go back to Magnesium Binding Sites List in 1jj7
Magnesium binding site 1 out of 1 in the Crystal Structure of the C-Terminal Atpase Domain of Human TAP1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the C-Terminal Atpase Domain of Human TAP1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg902

b:35.5
occ:1.00
O A:HOH46 1.8 37.2 1.0
OG A:SER545 2.0 24.7 1.0
O A:HOH61 2.0 37.7 1.0
O A:HOH36 2.1 29.8 1.0
O2B A:ADP752 2.1 29.5 1.0
O A:HOH40 2.4 33.3 1.0
CB A:SER545 3.1 25.8 1.0
PB A:ADP752 3.3 31.7 1.0
O1B A:ADP752 3.5 34.4 1.0
N A:SER545 3.9 25.7 1.0
O1A A:ADP752 4.0 34.3 1.0
CA A:SER545 4.1 25.9 1.0
OD2 A:ASP667 4.2 38.4 1.0
O3A A:ADP752 4.3 33.3 1.0
OD1 A:ASP667 4.3 39.4 1.0
O A:HOH38 4.3 32.6 1.0
NZ A:LYS544 4.4 38.9 1.0
O3B A:ADP752 4.4 31.0 1.0
PA A:ADP752 4.5 32.0 1.0
O A:HOH19 4.7 38.4 1.0
CG A:ASP667 4.7 40.2 1.0
O A:HOH56 4.7 46.9 1.0
O2A A:ADP752 4.7 33.7 1.0
O A:HOH79 4.8 49.0 1.0

Reference:

R.Gaudet, D.C.Wiley. Structure of the Abc Atpase Domain of Human TAP1, the Transporter Associated with Antigen Processing. Embo J. V. 20 4964 2001.
ISSN: ISSN 0261-4189
PubMed: 11532960
DOI: 10.1093/EMBOJ/20.17.4964
Page generated: Tue Aug 13 06:37:01 2024

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