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Magnesium in PDB 1y23: Crystal Structure of A Member of Hit Family of Proteins From Bacillus Subtilis

Protein crystallography data

The structure of Crystal Structure of A Member of Hit Family of Proteins From Bacillus Subtilis, PDB code: 1y23 was solved by K.R.Rajashankar, C.D.Lima, S.K.Burley, New York Sgx Research Center Forstructural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.96 / 2.30
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 86.444, 86.444, 180.046, 90.00, 90.00, 120.00
R / Rfree (%) 21.3 / 24.9

Other elements in 1y23:

The structure of Crystal Structure of A Member of Hit Family of Proteins From Bacillus Subtilis also contains other interesting chemical elements:

Zinc (Zn) 5 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of A Member of Hit Family of Proteins From Bacillus Subtilis (pdb code 1y23). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of A Member of Hit Family of Proteins From Bacillus Subtilis, PDB code: 1y23:

Magnesium binding site 1 out of 1 in 1y23

Go back to Magnesium Binding Sites List in 1y23
Magnesium binding site 1 out of 1 in the Crystal Structure of A Member of Hit Family of Proteins From Bacillus Subtilis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Member of Hit Family of Proteins From Bacillus Subtilis within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg2001

b:27.2
occ:1.00
O B:ARG141 2.3 24.0 1.0
OG B:SER144 2.4 18.8 1.0
O B:HOH2036 2.5 39.4 1.0
O B:HOH2023 2.7 17.5 1.0
O B:HOH2035 2.8 34.3 1.0
C B:ARG141 3.3 24.8 1.0
CB B:SER144 3.4 24.4 1.0
CA B:ARG141 3.8 26.2 1.0
O B:HOH2043 3.8 34.6 1.0
O B:HOH2024 4.1 31.1 1.0
CB B:ARG141 4.3 27.7 1.0
N B:SER144 4.4 22.4 1.0
CA B:SER144 4.5 23.8 1.0
N B:LEU142 4.5 23.2 1.0
O B:LYS140 4.8 27.3 1.0

Reference:

K.R.Rajashankar, C.D.Lima. Crystal Structure of A Member of Hit Family of Proteins From Bacillus Subtilis To Be Published.
Page generated: Sun Aug 10 07:40:09 2025

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