Magnesium in PDB 1zol: Native Beta-Pgm

All present enzymatic activity of Native Beta-Pgm:
5.4.2.6;

The structure of Native Beta-Pgm, PDB code: 1zol was solved by G.Zhang, L.W.Tremblay, J.Dai, L.Wang, D.Dunaway-Mariano, K.N.Allen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	18.91 / 1.90
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	52.760, 57.190, 75.640, 90.00, 90.00, 90.00
R / Rfree (%)	20.2 / 21.1

The binding sites of Magnesium atom in the Native Beta-Pgm (pdb code 1zol). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Native Beta-Pgm, PDB code: 1zol:

Magnesium binding site 1 out of 1 in the Native Beta-Pgm


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Native Beta-Pgm within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg801 b:22.0 occ:1.00 OD1 A:ASP8 1.8 17.5 1.0 OD1 A:ASP170 2.0 14.8 1.0 O A:ASP10 2.1 14.2 1.0 O A:HOH802 2.3 24.7 1.0 O A:HOH803 2.5 25.7 1.0 O A:HOH804 2.6 24.9 1.0 CG A:ASP8 2.9 17.1 1.0 CG A:ASP170 3.1 17.6 1.0 C A:ASP10 3.2 14.2 1.0 OD2 A:ASP8 3.4 16.7 1.0 OD2 A:ASP170 3.5 16.6 1.0 OE1 A:GLU169 3.7 19.8 1.0 CA A:ASP10 4.1 16.1 1.0 CB A:ASP8 4.2 15.3 1.0 N A:GLY11 4.2 15.2 1.0 CB A:ASP10 4.3 17.4 1.0 CD A:GLU169 4.3 16.1 1.0 N A:ASP10 4.3 14.7 1.0 CB A:ASP170 4.3 15.5 1.0 O A:HOH1006 4.3 44.1 1.0 N A:ASP170 4.4 16.5 1.0 CA A:GLY11 4.4 15.9 1.0 OE2 A:GLU169 4.4 17.9 1.0 OD2 A:ASP10 4.5 23.4 1.0 CG A:ASP10 4.8 19.9 1.0 CA A:ASP170 4.8 17.1 1.0 N A:SER171 4.8 18.5 1.0 C A:GLY11 4.9 16.1 1.0 OG A:SER171 4.9 18.5 1.0 CG2 A:VAL12 4.9 15.0 1.0 C A:LEU9 4.9 15.0 1.0 N A:VAL12 5.0 15.6 1.0

G.Zhang, J.Dai, L.Wang, D.Dunaway-Mariano, L.W.Tremblay, K.N.Allen. Catalytic Cycling in Beta-Phosphoglucomutase: A Kinetic and Structural Analysis Biochemistry V. 44 9404 2005.
ISSN: ISSN 0006-2960
PubMed: 15996095
DOI: 10.1021/BI050558P