Magnesium in PDB, part 518 (files: 20681-20720),
PDB 8d86-8dh5
Experimental structures of coordination spheres of Magnesium (Mg) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Magnesium atoms. PDB files: 20681-20720 (PDB 8d86-8dh5).
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8d86 (Mg: 5) - Isoreticular, Interpenetrating Co-Crystal of Replication Initiator Protein REPE54 and Symmetrical Expanded Duplex (31MER) Containing the Cognate REPE54 Sequence and An Additional G-C Rich Sequence Co- Crystallized with A Guest Small Molecule, Netropsin.
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8d8j (Mg: 29) - Yeast Mitochondrial Small Subunit Assembly Intermediate (State 1)
Other atoms:
Fe (4);
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8d8k (Mg: 72) - Yeast Mitochondrial Small Subunit Assembly Intermediate (State 2)
Other atoms:
Fe (4);
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8d8l (Mg: 72) - Yeast Mitochondrial Small Subunit Assembly Intermediate (State 3)
Other atoms:
Fe (4);
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8d96 (Mg: 1) - Human Dna Polymerase Alpha/Primase Elongation Complex I Bound to Primer/Template
Other atoms:
Fe (4);
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8d9d (Mg: 2) - Human Dna Polymerase-Alpha/Primase Elongation Complex II Bound to Primer/Template
Other atoms:
Fe (4);
Zn (3);
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8d9r (Mg: 18) - Ap-1, ARF1, Nef Lattice on Mhc-I Lipopeptide Incorporated Wide Membrane Tubes, Centered on Gamma-ARF1
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8d9s (Mg: 18) - Ap-1, ARF1, Nef Lattice on Mhc-I Lipopeptide Incorporated Wide Membrane Tubes, Centered on Beta-ARF1
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8dba (Mg: 23) - Crystal Structure of Dodecameric Kaic
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8dbe (Mg: 12) - Human PRPS1 with Adp; Hexamer
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8dbf (Mg: 24) - Human PRPS1 with Adp; Filament Interface
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8dbg (Mg: 12) - Human PRPS1 with Phosphate and Atp; Hexamer
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8dbh (Mg: 24) - Human PRPS1 with Phosphate and Atp; Filament Interface
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8dbi (Mg: 12) - Human PRPS1 with Phosphate, Atp, and R5P; Hexamer
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8dbj (Mg: 24) - Human PRPS1 with Phosphate, Atp, and R5P; Filament Interface
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8dbk (Mg: 12) - Human PRPS1 with Phosphate, Atp, and R5P; Hexamer with Resolved Catalytic Loops
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8dbl (Mg: 12) - Human PRPS1 with Phosphate and Prpp; Hexamer
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8dbm (Mg: 24) - Human PRPS1 with Phosphate and Prpp; Filament Interface
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8dbn (Mg: 12) - Human PRPS1-E307A Engineered Mutation with Phosphate, Atp, and R5P; Hexamer
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8dbo (Mg: 12) - Human PRPS1-E307A Engineered Mutation with Adp; Hexamer
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8dbs (Mg: 5) - E. Coli Atp Synthase Imaged in 10MM Mgatp STATE2 "Half-Up" Fo Classified
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8dc6 (Mg: 2) - Crystal Structure of P53 Y220C Covalently Bound to Indole KG6
Other atoms:
Zn (4);
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8dc7 (Mg: 2) - Crystal Structure of P53 Y220C Covalently Bound to Indole KG10
Other atoms:
Zn (1);
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8dc8 (Mg: 1) - Crystal Structure of P53 Y220C Covalently Bound to Azaindole KG13
Other atoms:
Zn (1);
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8dck (Mg: 6) - Structure of Hemolysin A Secretion System Hlyb/D Complex, Atp-Bound
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8dd0 (Mg: 6) - The Structure of the Native Cardiac Thin Filament Junction Region
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8del (Mg: 2) - Trimeric Heme-Free Cytochrome Variant Apocyt-TRICYT3
Other atoms:
Zn (1);
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8df9 (Mg: 12) - Structure of M. Kandleri Topoisomerase V in Complex with Dna. 38 Base Pair Asymmetric Dna Complex
Other atoms:
K (2);
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8dfc (Mg: 2) - Cryoem Structure of the 1:1 Adp-Tetrafluoroaluminate Stabilized Nitrogenase Complex From Azotobacter Vinelandii
Other atoms:
Mo (2);
Al (2);
F (8);
Fe (36);
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8dfd (Mg: 4) - Cryoem Structure of the 2:1 Adp-Tetrafluoroaluminate Stabilized Nitrogenase Complex From Azotobacter Vinelandii
Other atoms:
F (16);
Fe (40);
Mo (2);
Al (4);
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8dg5 (Mg: 11) - Structural Basis of Microrna Biogenesis By Dicer-1 and Its Partner Protein Loqs-Pb - Complex Iib
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8dg7 (Mg: 8) - Structural Basis of Microrna Biogenesis By Dicer-1 and Its Partner Protein Loqs-Pb - Complex III
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8dgc (Mg: 8) - AVS3 Bound to Phage Phiv-1 Terminase
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8dgf (Mg: 4) - AVS4 Bound to Phage Phiv-1 Portal
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8dgs (Mg: 2) - Cryo-Em Structure of A Ras/Raf Complex (State 1)
Other atoms:
Zn (2);
I (1);
F (1);
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8dgt (Mg: 2) - Cryo-Em Structure of A Ras/Raf Complex (State 2)
Other atoms:
Zn (2);
I (1);
F (1);
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8dh1 (Mg: 2) - T7 Rna Polymerase Elongation Complex with Unnatural Base Dds-Patp Pair
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8dh2 (Mg: 4) - T7 Rna Polymerase Elongation Complex with Unnatural Base Dds-Atp Mismatch
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8dh4 (Mg: 2) - T7 Rna Polymerase Elongation Complex with Unnatural Base Dpa-Dstp Pair
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8dh5 (Mg: 2) - T7 Rna Polymerase Elongation Complex with Unnatural Base Dpa-Atp Mismatch
Page generated: Tue Feb 25 10:42:27 2025
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