Magnesium in PDB 2a5j: Crystal Structure of Human RAB2B

The structure of Crystal Structure of Human RAB2B, PDB code: 2a5j was solved by A.Dong, J.Wang, Y.Shen, C.H.Arrowsmith, A.M.Edwards, M.Sundstrom, A.Bochkarev, H.W.Park, Structural Genomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	24.60 / 1.50
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	44.104, 54.732, 70.765, 90.00, 90.00, 90.00
R / Rfree (%)	19.5 / 22.5

The binding sites of Magnesium atom in the Crystal Structure of Human RAB2B (pdb code 2a5j). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Human RAB2B, PDB code: 2a5j:

Magnesium binding site 1 out of 1 in the Crystal Structure of Human RAB2B


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Human RAB2B within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg3000 b:8.1 occ:1.00 O3B A:GDP2696 2.0 7.9 1.0 O A:HOH3017 2.1 7.7 1.0 O A:HOH3091 2.1 8.1 1.0 O A:HOH3003 2.1 7.6 1.0 OG A:SER25 2.2 7.2 1.0 O A:HOH3032 2.2 8.9 1.0 PB A:GDP2696 3.2 7.9 1.0 CB A:SER25 3.3 7.4 1.0 O1B A:GDP2696 3.5 8.5 1.0 N A:SER25 3.9 6.5 1.0 OD1 A:ASP66 4.1 8.0 1.0 O A:HOH3036 4.1 19.9 1.0 OD2 A:ASP66 4.1 8.2 1.0 CA A:SER25 4.1 7.2 1.0 O2A A:GDP2696 4.1 9.3 1.0 OG1 A:THR67 4.2 8.7 1.0 O2B A:GDP2696 4.3 7.1 1.0 O3A A:GDP2696 4.3 7.9 1.0 OE2 A:GLU71 4.3 6.9 1.0 CG A:ASP66 4.5 8.4 1.0 N A:GLY69 4.5 9.2 1.0 PA A:GDP2696 4.6 8.5 1.0 O1A A:GDP2696 4.7 9.8 1.0 CB A:LYS24 4.8 6.5 1.0 CA A:GLY69 4.8 9.5 1.0 O A:HOH3001 4.9 8.0 1.0 NZ A:LYS24 4.9 7.3 1.0 C A:LYS24 4.9 6.9 1.0 CE A:LYS24 4.9 7.1 1.0

J.Wang, A.Dong, Y.Shen, C.H.Arrowsmith, A.M.Edwards, M.Sundstrom, A.Bochkarev, H.W.Park. Crystal Structure of Human RAB2B To Be Published.