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Magnesium in PDB 2cl6: Crystal Structure Analysis of A Fluorescent Form of H-Ras P21 in Complex with S-Caged Gtp

Protein crystallography data

The structure of Crystal Structure Analysis of A Fluorescent Form of H-Ras P21 in Complex with S-Caged Gtp, PDB code: 2cl6 was solved by B.U.Klink, R.S.Goody, A.J.Scheidig, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 69.01 / 1.24
Space group P 41
Cell size a, b, c (Å), α, β, γ (°) 69.097, 69.097, 35.465, 90.00, 90.00, 90.00
R / Rfree (%) 14.6 / 18.6

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure Analysis of A Fluorescent Form of H-Ras P21 in Complex with S-Caged Gtp (pdb code 2cl6). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure Analysis of A Fluorescent Form of H-Ras P21 in Complex with S-Caged Gtp, PDB code: 2cl6:

Magnesium binding site 1 out of 1 in 2cl6

Go back to Magnesium Binding Sites List in 2cl6
Magnesium binding site 1 out of 1 in the Crystal Structure Analysis of A Fluorescent Form of H-Ras P21 in Complex with S-Caged Gtp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure Analysis of A Fluorescent Form of H-Ras P21 in Complex with S-Caged Gtp within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Mg168

b:12.0
occ:0.50
O1G X:CAG167 1.9 14.0 0.5
O X:HOH2075 2.0 9.3 0.5
O X:HOH2130 2.0 5.8 0.5
OG X:SER17 2.1 11.9 0.5
O2B X:CAG167 2.1 11.6 0.5
O X:HOH2003 2.1 7.6 0.5
PG X:CAG167 3.1 12.8 0.5
CB X:SER17 3.2 11.3 0.5
PB X:CAG167 3.3 12.4 0.5
O3B X:CAG167 3.4 13.6 0.5
O X:ASP33 4.1 27.6 0.5
O2G X:CAG167 4.1 14.2 0.5
O X:HOH2135 4.1 17.0 0.5
N X:SER17 4.1 12.1 0.5
OD2 X:ASP57 4.1 14.7 0.5
O2A X:CAG167 4.1 15.8 0.5
CA X:SER17 4.2 11.6 0.5
O3A X:CAG167 4.2 14.2 0.5
O1B X:CAG167 4.3 13.0 0.5
O3G X:CAG167 4.4 15.8 0.5
O X:THR35 4.5 28.4 0.5
O X:THR58 4.6 17.3 0.5
PA X:CAG167 4.6 16.6 0.5
OD1 X:ASP57 4.6 18.0 0.5
C' X:CAG167 4.7 17.2 0.5
CG X:ASP57 4.8 17.0 0.5
O'L X:CAG167 4.9 21.3 0.5
O1A X:CAG167 5.0 16.2 0.5
O X:HOH2132 5.0 27.6 0.5

Reference:

B.U.Klink, R.S.Goody, A.J.Scheidig. A Newly Designed Microspectrofluorometer For Kinetic Studies on Protein Crystals in Combination with X-Ray Diffraction. Biophys.J. V. 91 981 2006.
ISSN: ISSN 0006-3495
PubMed: 16698776
DOI: 10.1529/BIOPHYSJ.105.078931
Page generated: Sun Aug 10 10:19:05 2025

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