Atomistry » Magnesium » PDB 2e75-2ein » 2e76
Atomistry »
  Magnesium »
    PDB 2e75-2ein »
      2e76 »

Magnesium in PDB 2e76: Crystal Structure of the Cytochrome B6F Complex with Tridecyl- Stigmatellin (Tds) From M.Laminosus

Enzymatic activity of Crystal Structure of the Cytochrome B6F Complex with Tridecyl- Stigmatellin (Tds) From M.Laminosus

All present enzymatic activity of Crystal Structure of the Cytochrome B6F Complex with Tridecyl- Stigmatellin (Tds) From M.Laminosus:
1.10.99.1;

Protein crystallography data

The structure of Crystal Structure of the Cytochrome B6F Complex with Tridecyl- Stigmatellin (Tds) From M.Laminosus, PDB code: 2e76 was solved by W.A.Cramer, E.Yamashita, H.Zhang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.27 / 3.41
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 157.227, 157.227, 363.295, 90.00, 90.00, 120.00
R / Rfree (%) 18.5 / 25.6

Other elements in 2e76:

The structure of Crystal Structure of the Cytochrome B6F Complex with Tridecyl- Stigmatellin (Tds) From M.Laminosus also contains other interesting chemical elements:

Cadmium (Cd) 1 atom
Iron (Fe) 6 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the Cytochrome B6F Complex with Tridecyl- Stigmatellin (Tds) From M.Laminosus (pdb code 2e76). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Cytochrome B6F Complex with Tridecyl- Stigmatellin (Tds) From M.Laminosus, PDB code: 2e76:

Magnesium binding site 1 out of 1 in 2e76

Go back to Magnesium Binding Sites List in 2e76
Magnesium binding site 1 out of 1 in the Crystal Structure of the Cytochrome B6F Complex with Tridecyl- Stigmatellin (Tds) From M.Laminosus


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Cytochrome B6F Complex with Tridecyl- Stigmatellin (Tds) From M.Laminosus within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg201

b:44.8
occ:1.00
 MG B:CLA201 0.0 44.8 1.0
O B:HOH211 1.9 15.4 1.0
NA B:CLA201 2.0 43.2 1.0
NB B:CLA201 2.1 50.8 1.0
ND B:CLA201 2.1 52.5 1.0
NC B:CLA201 2.1 61.0 1.0
C1A B:CLA201 2.9 32.0 1.0
C4D B:CLA201 3.0 46.0 1.0
C4A B:CLA201 3.0 46.9 1.0
C4B B:CLA201 3.1 51.9 1.0
C1C B:CLA201 3.1 51.8 1.0
C1B B:CLA201 3.1 38.1 1.0
C4C B:CLA201 3.1 63.6 1.0
C1D B:CLA201 3.2 33.2 1.0
CHA B:CLA201 3.4 32.0 1.0
CHB B:CLA201 3.4 39.0 1.0
CHC B:CLA201 3.4 43.4 1.0
O B:HOH212 3.6 48.0 1.0
CHD B:CLA201 3.6 49.1 1.0
C3D B:CLA201 4.2 39.0 1.0
C2A B:CLA201 4.3 38.4 1.0
C3A B:CLA201 4.3 30.8 1.0
C3B B:CLA201 4.4 58.8 1.0
C2C B:CLA201 4.4 53.8 1.0
OG1 B:THR140 4.4 58.6 1.0
C2D B:CLA201 4.4 34.4 1.0
C2B B:CLA201 4.4 61.0 1.0
C3C B:CLA201 4.5 59.0 1.0
CBQ B:OPC1001 4.8 64.2 1.0
CBS B:OPC1001 4.8 62.1 1.0
CD1 B:LEU108 4.8 38.3 1.0
CBD B:CLA201 4.9 31.5 1.0
CAA B:CLA201 5.0 49.6 1.0

Reference:

E.Yamashita, H.Zhang, W.A.Cramer. Structure of the Cytochrome B(6)F Complex: Quinone Analogue Inhibitors As Ligands of Heme C(N) J.Mol.Biol. V. 370 39 2007.
ISSN: ISSN 0022-2836
PubMed: 17498743
DOI: 10.1016/J.JMB.2007.04.011
Page generated: Tue Aug 13 22:41:22 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy