Atomistry » Magnesium » PDB 2e75-2ein » 2eh3
Atomistry »
  Magnesium »
    PDB 2e75-2ein »
      2eh3 »

Magnesium in PDB 2eh3: Crystal Structure of AQ_1058, A Transcriptional Regulator (Terr/Acrr Family) From Aquifex Aeolicus VF5

Protein crystallography data

The structure of Crystal Structure of AQ_1058, A Transcriptional Regulator (Terr/Acrr Family) From Aquifex Aeolicus VF5, PDB code: 2eh3 was solved by Y.Agari, A.Shinkai, S.Yokoyama, S.Kuramitsu, Riken Structuralgenomics/Proteomics Initiative (Rsgi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.92 / 1.55
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 49.857, 54.919, 73.144, 90.00, 90.00, 90.00
R / Rfree (%) 20.6 / 22.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of AQ_1058, A Transcriptional Regulator (Terr/Acrr Family) From Aquifex Aeolicus VF5 (pdb code 2eh3). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of AQ_1058, A Transcriptional Regulator (Terr/Acrr Family) From Aquifex Aeolicus VF5, PDB code: 2eh3:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 2eh3

Go back to Magnesium Binding Sites List in 2eh3
Magnesium binding site 1 out of 2 in the Crystal Structure of AQ_1058, A Transcriptional Regulator (Terr/Acrr Family) From Aquifex Aeolicus VF5


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of AQ_1058, A Transcriptional Regulator (Terr/Acrr Family) From Aquifex Aeolicus VF5 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1001

b:5.2
occ:1.00
OE1 A:GLU78 2.3 8.8 1.0
O A:HOH1046 2.4 14.5 1.0
O A:HOH1163 2.4 11.9 1.0
OE1 A:GLU75 2.4 10.2 1.0
OE2 A:GLU75 2.5 11.5 1.0
CD A:GLU75 2.8 12.3 1.0
CD A:GLU78 3.2 10.3 1.0
OE2 A:GLU78 3.4 7.6 1.0
O A:HOH1031 4.0 16.4 1.0
O A:HOH1022 4.2 13.1 1.0
O A:HOH1024 4.2 33.4 1.0
CG A:GLU75 4.3 11.2 1.0
MG A:MG1002 4.4 4.1 1.0
CG A:GLU78 4.6 8.7 1.0
O A:HOH1042 4.9 9.2 1.0

Magnesium binding site 2 out of 2 in 2eh3

Go back to Magnesium Binding Sites List in 2eh3
Magnesium binding site 2 out of 2 in the Crystal Structure of AQ_1058, A Transcriptional Regulator (Terr/Acrr Family) From Aquifex Aeolicus VF5


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of AQ_1058, A Transcriptional Regulator (Terr/Acrr Family) From Aquifex Aeolicus VF5 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1002

b:4.1
occ:1.00
OE2 A:GLU78 2.3 7.6 1.0
O A:HOH1042 2.4 9.2 1.0
OE2 A:GLU82 2.5 9.4 1.0
CD A:GLU78 3.3 10.3 1.0
CD A:GLU82 3.5 9.2 1.0
OE1 A:GLU82 3.7 10.2 1.0
NZ A:LYS161 3.9 11.8 1.0
CG A:GLU78 4.0 8.7 1.0
OE1 A:GLU78 4.0 8.8 1.0
MG A:MG1001 4.4 5.2 1.0
O A:HOH1022 4.4 13.1 1.0
O A:HOH1031 4.5 16.4 1.0
CE A:LYS161 4.8 16.4 1.0
CG A:GLU82 4.9 10.4 1.0

Reference:

Y.Agari, A.Shinkai, S.Yokoyama, S.Kuramitsu. Crystal Structure of AQ_1058, A Transcriptional Regulator (Terr/Acrr Family) From Aquifex Aeolicus VF5 To Be Published.
Page generated: Sun Aug 10 10:38:06 2025

Last articles

Mg in 7QP0
Mg in 7QOW
Mg in 7QPF
Mg in 7QOQ
Mg in 7QOL
Mg in 7QOU
Mg in 7QOP
Mg in 7QCO
Mg in 7QIX
Mg in 7QOH
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy