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Magnesium in PDB 2g88: Msreca-Datp Complex

Protein crystallography data

The structure of Msreca-Datp Complex, PDB code: 2g88 was solved by R.Krishna, G.P.Manjunath, P.Kumar, A.Surolia, N.R.Chandra, K.Muniyappa, M.Vijayan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.40 / 3.20
Space group P 61
Cell size a, b, c (Å), α, β, γ (°) 108.212, 108.212, 72.970, 90.00, 90.00, 120.00
R / Rfree (%) 23.7 / 30.9

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Msreca-Datp Complex (pdb code 2g88). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Msreca-Datp Complex, PDB code: 2g88:

Magnesium binding site 1 out of 1 in 2g88

Go back to Magnesium Binding Sites List in 2g88
Magnesium binding site 1 out of 1 in the Msreca-Datp Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Msreca-Datp Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg2633

b:40.1
occ:1.00
OE1 A:GLN259 2.1 67.2 1.0
O3G A:DTP833 2.3 99.5 1.0
O A:HOH500 2.4 49.1 1.0
O A:PHE257 3.2 16.7 1.0
CD A:GLN259 3.3 67.2 1.0
PG A:DTP833 3.8 99.5 1.0
CG A:GLN259 4.1 67.2 1.0
CA A:LYS258 4.2 8.9 1.0
N A:GLN259 4.2 31.0 1.0
NE2 A:GLN259 4.2 67.2 1.0
C A:PHE257 4.3 16.7 1.0
CB A:GLN259 4.3 67.2 1.0
C A:LYS258 4.4 8.9 1.0
O2G A:DTP833 4.5 99.5 1.0
O1G A:DTP833 4.6 99.5 1.0
O3B A:DTP833 4.7 99.5 1.0
N A:LYS258 4.8 8.9 1.0
CA A:GLN259 5.0 31.0 1.0

Reference:

R.Krishna, G.P.Manjunath, P.Kumar, A.Surolia, N.R.Chandra, K.Muniyappa, M.Vijayan. Crystallographic Identification of An Ordered C-Terminal Domain and A Second Nucleotide-Binding Site in Reca: New Insights Into Allostery. Nucleic Acids Res. V. 34 2186 2006.
ISSN: ISSN 0305-1048
PubMed: 16648362
DOI: 10.1093/NAR/GKL107
Page generated: Tue Aug 13 23:24:12 2024

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