Atomistry » Magnesium » PDB 2g9z-2gqp » 2gqp
Atomistry »
  Magnesium »
    PDB 2g9z-2gqp »
      2gqp »

Magnesium in PDB 2gqp: N-Domain of GRP94 in Complex with the Novel Ligand N-Propyl Carboxyamido Adenosine

Protein crystallography data

The structure of N-Domain of GRP94 in Complex with the Novel Ligand N-Propyl Carboxyamido Adenosine, PDB code: 2gqp was solved by R.M.Immormino, D.T.Gewirth, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.78 / 1.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 65.690, 84.840, 95.740, 90.00, 90.00, 90.00
R / Rfree (%) 21.5 / 23.5

Magnesium Binding Sites:

The binding sites of Magnesium atom in the N-Domain of GRP94 in Complex with the Novel Ligand N-Propyl Carboxyamido Adenosine (pdb code 2gqp). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the N-Domain of GRP94 in Complex with the Novel Ligand N-Propyl Carboxyamido Adenosine, PDB code: 2gqp:

Magnesium binding site 1 out of 1 in 2gqp

Go back to Magnesium Binding Sites List in 2gqp
Magnesium binding site 1 out of 1 in the N-Domain of GRP94 in Complex with the Novel Ligand N-Propyl Carboxyamido Adenosine


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of N-Domain of GRP94 in Complex with the Novel Ligand N-Propyl Carboxyamido Adenosine within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg600

b:31.1
occ:1.00
O A:HOH803 2.0 31.0 1.0
O A:HOH805 2.1 32.0 1.0
O A:HOH802 2.1 32.8 1.0
O A:HOH804 2.1 31.7 1.0
O A:HOH807 2.1 32.7 1.0
O A:HOH806 2.1 32.4 1.0
O A:HOH848 3.8 42.1 1.0
OD2 A:ASP262 3.9 37.0 1.0
O A:HOH992 4.0 46.6 1.0
OD1 A:ASP257 4.0 32.0 1.0
OG1 A:THR263 4.0 27.3 1.0
O A:HOH919 4.1 42.7 1.0
OD2 A:ASP257 4.2 32.0 1.0
O A:HOH931 4.4 38.9 1.0
O A:HOH874 4.4 33.6 1.0
CG A:ASP257 4.5 30.5 1.0
O A:HOH996 4.8 45.3 1.0
CG A:ASP262 4.9 33.7 1.0

Reference:

R.M.Immormino, D.T.Gewirth. Adensine Scaffold Inhibitors of GRP94 To Be Published.
Page generated: Tue Aug 13 23:33:39 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy