Magnesium in PDB 2hb5: Crystal Structure of the Moloney Murine Leukemia Virus Rnase H Domain

All present enzymatic activity of Crystal Structure of the Moloney Murine Leukemia Virus Rnase H Domain:
3.1.26.4;

The structure of Crystal Structure of the Moloney Murine Leukemia Virus Rnase H Domain, PDB code: 2hb5 was solved by D.Lim, G.G.Gregorio, C.Bingman, E.Martinez-Hackert, W.A.Hendrickson, S.P.Goff, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	21.66 / 1.59
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	32.326, 34.107, 34.802, 78.21, 69.85, 64.79
R / Rfree (%)	19.6 / 22.1

The binding sites of Magnesium atom in the Crystal Structure of the Moloney Murine Leukemia Virus Rnase H Domain (pdb code 2hb5). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Moloney Murine Leukemia Virus Rnase H Domain, PDB code: 2hb5:

Magnesium binding site 1 out of 1 in the Crystal Structure of the Moloney Murine Leukemia Virus Rnase H Domain


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Moloney Murine Leukemia Virus Rnase H Domain within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg200 b:26.4 occ:1.00 OD2 A:ASP87 2.0 32.4 1.0 OE2 A:GLU66 2.4 18.5 0.5 OD2 A:ASP28 2.4 21.4 1.0 O A:HOH202 2.5 44.8 0.9 O A:HOH203 2.6 54.5 1.0 CG A:ASP87 2.7 27.6 1.0 OD1 A:ASP87 2.8 31.2 1.0 CD A:GLU66 3.3 17.4 0.5 OE1 A:GLU66 3.5 16.4 0.5 CG A:ASP28 3.6 18.4 1.0 O A:HOH263 3.7 36.3 1.0 OD1 A:ASP146 4.1 20.7 0.5 CB A:ASP87 4.1 24.0 1.0 O A:GLY29 4.3 16.3 1.0 OE2 A:GLU66 4.3 16.7 0.5 C A:ASP87 4.4 21.3 1.0 OD1 A:ASP28 4.4 21.1 1.0 CG A:GLU66 4.5 14.0 0.5 CB A:ASP28 4.5 12.1 1.0 O A:ASP87 4.6 23.2 1.0 N A:SER88 4.6 18.8 1.0 CD A:GLU66 4.6 14.2 0.5 CG A:GLU66 4.6 15.7 0.5 CA A:ASP87 4.7 21.1 1.0 N A:GLY29 4.7 10.6 1.0 CA A:ASP28 4.7 8.9 1.0 N A:ASP87 4.8 19.8 1.0 O A:HOH246 4.8 33.0 1.0 CB A:SER88 4.9 15.2 1.0 CA A:SER88 5.0 17.1 1.0

D.Lim, G.G.Gregorio, C.Bingman, E.Martinez-Hackert, W.A.Hendrickson, S.P.Goff. Crystal Structure of the Moloney Murine Leukemia Virus Rnase H Domain. J.Virol. V. 80 8379 2006.
ISSN: ISSN 0022-538X
PubMed: 16912289
DOI: 10.1128/JVI.00750-06