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Magnesium in PDB 2hjo: Crystal Structure of V224H Design Intermediate For Gfp Metal Ion Reporter

Protein crystallography data

The structure of Crystal Structure of V224H Design Intermediate For Gfp Metal Ion Reporter, PDB code: 2hjo was solved by D.P.Barondeau, J.L.Tubbs, J.A.Tainer, E.D.Getzoff, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.00 / 1.25
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 51.630, 62.150, 69.136, 90.00, 90.00, 90.00
R / Rfree (%) 12.8 / 16.5

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of V224H Design Intermediate For Gfp Metal Ion Reporter (pdb code 2hjo). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of V224H Design Intermediate For Gfp Metal Ion Reporter, PDB code: 2hjo:

Magnesium binding site 1 out of 1 in 2hjo

Go back to Magnesium Binding Sites List in 2hjo
Magnesium binding site 1 out of 1 in the Crystal Structure of V224H Design Intermediate For Gfp Metal Ion Reporter


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of V224H Design Intermediate For Gfp Metal Ion Reporter within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg301

b:11.2
occ:1.00
O A:HOH1004 2.0 12.2 1.0
OD2 A:ASP197 2.0 11.6 1.0
O A:HOH1001 2.1 12.9 1.0
O A:HOH1002 2.1 14.0 1.0
O A:HOH1005 2.1 12.9 1.0
O A:HOH1003 2.1 13.4 1.0
CG A:ASP197 3.1 11.7 1.0
OD1 A:ASP197 3.4 16.3 1.0
O A:HOH1107 4.1 22.1 1.0
O A:HOH1108 4.3 14.3 1.0
O A:HOH1115 4.3 26.1 1.0
CB A:ASP197 4.4 10.6 1.0
O A:HOH1190 4.6 26.0 1.0
CE1 A:HIS81 4.7 11.1 1.0

Reference:

D.P.Barondeau, J.L.Tubbs, J.A.Tainer, E.D.Getzoff. Iterative Structure-Based Design of A Green Fluorescent Protein Metal Ion Reporter To Be Published.
Page generated: Sun Aug 10 11:23:45 2025

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