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Magnesium in PDB 2iaf: Crystal Structure of A Fragment (Residues 11 to 161) of L-Serine Dehydratase From Legionella Pneumophila

Protein crystallography data

The structure of Crystal Structure of A Fragment (Residues 11 to 161) of L-Serine Dehydratase From Legionella Pneumophila, PDB code: 2iaf was solved by B.Nocek, R.Mulligan, S.Moy, A.Joachimiak, Midwest Center For Structuralgenomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 2.05
Space group I 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 56.319, 76.835, 108.135, 90.00, 90.00, 90.00
R / Rfree (%) 19.5 / 22.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of A Fragment (Residues 11 to 161) of L-Serine Dehydratase From Legionella Pneumophila (pdb code 2iaf). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of A Fragment (Residues 11 to 161) of L-Serine Dehydratase From Legionella Pneumophila, PDB code: 2iaf:

Magnesium binding site 1 out of 1 in 2iaf

Go back to Magnesium Binding Sites List in 2iaf
Magnesium binding site 1 out of 1 in the Crystal Structure of A Fragment (Residues 11 to 161) of L-Serine Dehydratase From Legionella Pneumophila


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Fragment (Residues 11 to 161) of L-Serine Dehydratase From Legionella Pneumophila within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg149

b:35.6
occ:0.50
OD1 A:ASN82 2.3 32.2 1.0
O A:LEU79 2.3 30.8 1.0
O A:ASP80 2.6 28.2 1.0
CG A:ASN82 3.1 31.7 1.0
C A:ASP80 3.2 28.4 1.0
ND2 A:ASN82 3.4 27.2 1.0
C A:LEU79 3.4 31.2 1.0
CA A:ASP80 3.5 28.3 1.0
O A:HOH160 3.8 43.1 1.0
N A:ASP80 3.9 29.3 1.0
N A:ASN82 4.1 28.1 1.0
N A:SER81 4.2 28.0 1.0
CB A:ASN82 4.3 28.3 1.0
C A:SER81 4.5 27.8 1.0
CA A:ASN82 4.7 28.6 1.0
CA A:LEU79 4.7 31.6 1.0
CA A:SER81 4.8 27.8 1.0
OD1 A:ASP80 4.8 28.5 1.0
CB A:ASP80 5.0 27.9 1.0

Reference:

B.Nocek, R.Mulligan, S.Moy, A.Joachimiak. Crystal Structure of A Fragment (Residues 11 to 161) of L-Serine Dehydratase From Legionella Pneumophila To Be Published.
Page generated: Sun Aug 10 11:33:24 2025

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