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Magnesium in PDB 2o0o: Crystal Structure of TL1A

Protein crystallography data

The structure of Crystal Structure of TL1A, PDB code: 2o0o was solved by T.C.Jin, S.Kim, F.Guo, A.J.Howard, Y.Z.Zhang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 3.00
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 116.754, 116.754, 118.941, 90.00, 90.00, 90.00
R / Rfree (%) 24.3 / 29.5

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of TL1A (pdb code 2o0o). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of TL1A, PDB code: 2o0o:

Magnesium binding site 1 out of 1 in 2o0o

Go back to Magnesium Binding Sites List in 2o0o
Magnesium binding site 1 out of 1 in the Crystal Structure of TL1A


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of TL1A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg271

b:6.8
occ:1.00
OE2 A:GLU120 2.9 43.7 1.0
ND1 A:HIS121 4.0 37.6 1.0
CE1 A:HIS121 4.0 39.3 1.0
CD A:GLU120 4.0 41.9 1.0
O A:TRP119 4.1 32.0 1.0
CA A:GLU120 4.7 31.2 1.0
OE1 A:GLU120 4.8 42.6 1.0
CG A:GLU120 4.9 37.3 1.0
N A:HIS121 4.9 31.4 1.0
OE1 A:GLU122 5.0 45.3 1.0

Reference:

T.Jin, F.Guo, S.Kim, A.Howard, Y.Z.Zhang. X-Ray Crystal Structure of Tnf Ligand Family Member TL1A at 2.1A. Biochem.Biophys.Res.Commun. V. 364 1 2007.
ISSN: ISSN 0006-291X
PubMed: 17935696
DOI: 10.1016/J.BBRC.2007.09.097
Page generated: Sun Aug 10 12:10:01 2025

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