Magnesium in PDB 2oxr: PAB0955 Crystal Structure : A Gtpase in Gdp and Mg Bound Form From Pyrococcus Abyssi (After Gtp Hydrolysis)

The structure of PAB0955 Crystal Structure : A Gtpase in Gdp and Mg Bound Form From Pyrococcus Abyssi (After Gtp Hydrolysis), PDB code: 2oxr was solved by S.Gras, P.Carpentier, J.Armengaud, D.Housset, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	15.00 / 2.40
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	60.189, 60.189, 116.512, 90.00, 90.00, 120.00
R / Rfree (%)	21.2 / 32.4

The binding sites of Magnesium atom in the PAB0955 Crystal Structure : A Gtpase in Gdp and Mg Bound Form From Pyrococcus Abyssi (After Gtp Hydrolysis) (pdb code 2oxr). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the PAB0955 Crystal Structure : A Gtpase in Gdp and Mg Bound Form From Pyrococcus Abyssi (After Gtp Hydrolysis), PDB code: 2oxr:

Magnesium binding site 1 out of 1 in the PAB0955 Crystal Structure : A Gtpase in Gdp and Mg Bound Form From Pyrococcus Abyssi (After Gtp Hydrolysis)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of PAB0955 Crystal Structure : A Gtpase in Gdp and Mg Bound Form From Pyrococcus Abyssi (After Gtp Hydrolysis) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg501 b:55.2 occ:1.00 O A:HOH505 2.3 56.4 1.0 OG1 A:THR14 2.3 35.5 1.0 O3B A:GDP502 2.8 61.4 1.0 O A:HOH554 2.9 42.0 1.0 CB A:THR14 3.0 36.5 1.0 O1B A:GDP502 3.1 62.7 1.0 CG2 A:VAL39 3.3 47.7 1.0 PB A:GDP502 3.5 62.9 1.0 CG2 A:THR14 3.6 35.7 1.0 O A:HOH533 4.2 38.0 1.0 O2A A:GDP502 4.2 63.1 1.0 NZ A:LYS13 4.2 34.8 1.0 O3A A:GDP502 4.3 62.6 1.0 CB A:VAL39 4.3 49.2 1.0 CA A:THR14 4.3 37.1 1.0 N A:THR14 4.5 38.1 1.0 OD2 A:ASP36 4.6 38.1 1.0 PA A:GDP502 4.6 62.9 1.0 O2B A:GDP502 4.7 61.5 1.0 O1A A:GDP502 4.8 63.2 1.0 OD2 A:ASP101 4.9 31.0 1.0

S.Gras, V.Chaumont, B.Fernandez, P.Carpentier, F.Charrier-Savournin, S.Schmitt, C.Pineau, D.Flament, A.Hecker, P.Forterre, J.Armengaud, D.Housset. Structural Insights Into A New Homodimeric Self-Activated Gtpase Family. Embo Rep. V. 8 569 2007.
ISSN: ISSN 1469-221X
PubMed: 17468740
DOI: 10.1038/SJ.EMBOR.7400958