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Magnesium in PDB 2q0y: Crystal Structure of GCN5-Related N-Acetyltransferase (YP_295895.1) From Ralstonia Eutropha JMP134 at 1.80 A Resolution

Protein crystallography data

The structure of Crystal Structure of GCN5-Related N-Acetyltransferase (YP_295895.1) From Ralstonia Eutropha JMP134 at 1.80 A Resolution, PDB code: 2q0y was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.59 / 1.80
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 102.520, 102.520, 39.680, 90.00, 90.00, 120.00
R / Rfree (%) 14.3 / 16.5

Other elements in 2q0y:

The structure of Crystal Structure of GCN5-Related N-Acetyltransferase (YP_295895.1) From Ralstonia Eutropha JMP134 at 1.80 A Resolution also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of GCN5-Related N-Acetyltransferase (YP_295895.1) From Ralstonia Eutropha JMP134 at 1.80 A Resolution (pdb code 2q0y). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of GCN5-Related N-Acetyltransferase (YP_295895.1) From Ralstonia Eutropha JMP134 at 1.80 A Resolution, PDB code: 2q0y:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 2q0y

Go back to Magnesium Binding Sites List in 2q0y
Magnesium binding site 1 out of 2 in the Crystal Structure of GCN5-Related N-Acetyltransferase (YP_295895.1) From Ralstonia Eutropha JMP134 at 1.80 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of GCN5-Related N-Acetyltransferase (YP_295895.1) From Ralstonia Eutropha JMP134 at 1.80 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg154

b:19.6
occ:1.00
O A:HOH365 2.1 18.6 0.5
OE2 A:GLU145 2.2 15.8 1.0
NE2 A:HIS126 2.4 23.3 1.0
CE1 A:HIS126 2.6 20.0 1.0
CD A:GLU145 2.8 16.2 1.0
OE1 A:GLU145 2.9 16.2 1.0
CD2 A:HIS126 3.6 24.7 1.0
O A:HOH364 3.8 16.9 1.0
ND1 A:HIS126 3.8 21.2 1.0
CG A:GLU145 4.2 11.3 1.0
CG A:HIS126 4.4 16.5 1.0
CB A:GLU145 4.8 10.0 1.0

Magnesium binding site 2 out of 2 in 2q0y

Go back to Magnesium Binding Sites List in 2q0y
Magnesium binding site 2 out of 2 in the Crystal Structure of GCN5-Related N-Acetyltransferase (YP_295895.1) From Ralstonia Eutropha JMP134 at 1.80 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of GCN5-Related N-Acetyltransferase (YP_295895.1) From Ralstonia Eutropha JMP134 at 1.80 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg155

b:41.4
occ:1.00
O1 A:FMT159 2.0 56.1 1.0
OD2 A:ASP9 2.4 44.9 1.0
SG A:CYS7 2.6 21.0 1.0
C A:FMT159 3.0 55.9 1.0
O2 A:FMT159 3.2 56.4 1.0
CG A:ASP9 3.4 31.3 1.0
CB A:CYS7 3.4 15.4 1.0
CB A:ASP9 3.8 22.8 1.0
O A:HOH236 4.1 35.1 1.0
N A:ASP9 4.4 18.0 1.0
OD1 A:ASP9 4.5 31.6 1.0
CA A:ASP9 4.7 19.1 1.0
CA A:CYS7 4.8 16.6 1.0
N A:ILE8 4.9 19.7 1.0
O A:HOH255 4.9 28.1 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Wed Aug 14 02:33:28 2024

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